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B. taurus Gene: TRIM69 - ENSBTAG00000007518 - Bos taurus (cattle)

General information

Ensembl IDENSBTAG00000007518
NameTRIM69
Descriptiontripartite motif containing 69 [Source:HGNC Symbol;Acc:HGNC:17857]
OrganismBos taurus (cattle)
Synonym(s)rnf36, trif, trimless
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000112sexually immature stage
593
  • 593
  • 1.62e3
  • 2.61e3
  • 8.77e3
97.43
  • 97.43
  • 93.00
  • 88.70
  • 61.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.29e3
  • 1.29e3
94.40
  • 94.40
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.34e3
  • 1.34e3
94.20
  • 94.20
AEIR
  • AEIR
UBERON:0004358caput epididymis
  • UBERON:0018241prime adult stage
1.08e4
  • 1.08e4
53.01
  • 53.01
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
  • 2.10e4
49.00
  • 49.00
  • 8.77
AEIR
  • AEIR
  • AEIR
CL:0000711cumulus cell
  • UBERON:0000104life cycle
1.39e4
  • 1.39e4
39.77
  • 39.77
AEIR
  • AEIR
UBERON:0004703dorsal thalamus
  • UBERON:0018241prime adult stage
1.48e4
  • 1.48e4
36.03
  • 36.03
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.52e4
  • 1.52e4
  • 1.72e4
34.00
  • 34.00
  • 25.35
AEIR
  • AEIR
  • AEIR
UBERON:0001913milk
  • UBERON:0000113post-juvenile adult stage
1.89e4
  • 1.89e4
17.95
  • 17.95
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Amniota14 species14 genesCompare expression

Orthology information comes from OMA : ENSBTAG00000007518.

Cross-references

EnsemblENSBTAG00000007518 (TRIM69)
HGNCHGNC:17857 (TRIM69)
EMBLDAAA02030051
Uniprot/SPTREMBLE1BID7, E1BID7_BOVIN

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