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B. taurus Gene: - ENSBTAG00000008633 - Bos taurus (cattle)

General information

Ensembl IDENSBTAG00000008633
Name-
DescriptionStructure-specific endonuclease subunit SLX1 [Source:UniProtKB/Swiss-Prot;Acc:Q32PI0]
OrganismBos taurus (cattle)
Synonym(s)giyd, giyd1, slx1
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.57e3
  • 1.57e3
  • 5.11e3
  • 1.09e4
  • 1.37e4
93.20
  • 93.20
  • 77.86
  • 52.69
  • 40.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0000104life cycle
1.71e3
  • 1.71e3
92.61
  • 92.61
AEIR
  • AEIR
CL:0000775neutrophil
  • UBERON:0018241prime adult stage
1.80e3
  • 1.80e3
92.18
  • 92.18
AEIR
  • AEIR
UBERON:0001739laryngeal cartilage
  • UBERON:0000104life cycle
1.81e3
  • 1.81e3
92.16
  • 92.16
AEIR
  • AEIR
UBERON:0001826nasal cavity mucosa
  • UBERON:0000104life cycle
1.89e3
  • 1.89e3
91.83
  • 91.83
AEIR
  • AEIR
UBERON:0003309floor plate of diencephalon
  • UBERON:0018241prime adult stage
2.03e3
  • 2.03e3
91.19
  • 91.19
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
2.13e3
  • 2.13e3
90.75
  • 90.75
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
2.26e3
  • 2.26e3
90.21
  • 90.21
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
2.29e3
  • 2.29e3
90.07
  • 90.07
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.31e3
  • 2.31e3
  • 5.94e3
90.01
  • 90.01
  • 74.26
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000068embryo stage
2.45e3
  • 2.45e3
89.38
  • 89.38
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.47e3
  • 2.47e3
  • 5.72e3
89.29
  • 89.29
  • 75.21
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
2.51e3
  • 2.51e3
89.11
  • 89.11
AEIR
  • AEIR
UBERON:0000002uterine cervix
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.56e3
  • 2.56e3
  • 2.58e3
88.93
  • 88.93
  • 88.84
AEIR
  • AEIR
  • AEIR
UBERON:0016538temporal cortex
  • UBERON:0000104life cycle
2.56e3
  • 2.56e3
88.92
  • 88.92
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0000104life cycle
2.64e3
  • 2.64e3
88.57
  • 88.57
AEIR
  • AEIR
UBERON:0000378tongue muscle
  • UBERON:0000104life cycle
2.70e3
  • 2.70e3
88.29
  • 88.29
AEIR
  • AEIR
UBERON:0016632isthmus of fallopian tube
  • UBERON:0000104life cycle
2.75e3
  • 2.75e3
88.10
  • 88.10
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.98e3
  • 2.98e3
  • 3.30e3
  • 3.75e3
87.08
  • 87.08
  • 85.70
  • 83.75
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
3.05e3
  • 3.05e3
  • 3.29e3
  • 3.59e3
86.79
  • 86.79
  • 85.75
  • 84.46
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
3.06e3
  • 3.06e3
  • 4.69e3
  • 5.45e3
  • 6.07e3
86.76
  • 86.76
  • 79.69
  • 76.38
  • 73.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
3.12e3
  • 3.12e3
  • 6.07e3
  • 1.21e4
86.47
  • 86.47
  • 73.69
  • 47.69
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004358caput epididymis
  • UBERON:0018241prime adult stage
3.14e3
  • 3.14e3
86.41
  • 86.41
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000104life cycle
3.26e3
  • 3.26e3
85.86
  • 85.86
AEIR
  • AEIR
UBERON:0001000vas deferens
  • UBERON:0018241prime adult stage
3.29e3
  • 3.29e3
85.77
  • 85.77
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
3.29e3
  • 3.29e3
  • 3.55e3
85.77
  • 85.77
  • 84.63
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.31e3
  • 3.31e3
  • 4.87e3
85.64
  • 85.64
  • 78.89
AEIR
  • AEIR
  • AEIR
UBERON:0005386olfactory segment of nasal mucosa
  • UBERON:0000104life cycle
3.41e3
  • 3.41e3
85.24
  • 85.24
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.47e3
  • 3.47e3
  • 5.12e3
84.98
  • 84.98
  • 77.80
AEIR
  • AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0000104life cycle
3.60e3
  • 3.60e3
84.40
  • 84.40
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
3.62e3
  • 3.62e3
  • 5.65e3
84.30
  • 84.30
  • 75.52
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
3.63e3
  • 3.63e3
84.28
  • 84.28
AEIR
  • AEIR
UBERON:0008285rumen epithelium
  • UBERON:0018241prime adult stage
3.67e3
  • 3.67e3
84.10
  • 84.10
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0000104life cycle
3.69e3
  • 3.69e3
84.02
  • 84.02
AEIR
  • AEIR
UBERON:0007625pigment epithelium of eye
  • UBERON:0000104life cycle
3.69e3
  • 3.69e3
84.00
  • 84.00
AEIR
  • AEIR
UBERON:0007361ruminant reticulum
  • UBERON:0018241prime adult stage
3.70e3
  • 3.70e3
83.97
  • 83.97
AEIR
  • AEIR
UBERON:0007362omasum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
3.77e3
  • 3.77e3
  • 3.77e3
83.67
  • 83.67
  • 83.65
AEIR
  • AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0000104life cycle
3.85e3
  • 3.85e3
83.31
  • 83.31
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
3.88e3
  • 3.88e3
  • 8.31e3
83.19
  • 83.19
  • 63.99
AEIR
  • AEIR
  • AEIR
UBERON:0000057urethra
  • UBERON:0000104life cycle
3.90e3
  • 3.90e3
83.10
  • 83.10
AEIR
  • AEIR
UBERON:0007367surface of tongue
  • UBERON:0000104life cycle
3.93e3
  • 3.93e3
82.97
  • 82.97
AEIR
  • AEIR
UBERON:0000051fornix of vagina
  • UBERON:0000104life cycle
3.98e3
  • 3.98e3
82.77
  • 82.77
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000104life cycle
3.99e3
  • 3.99e3
82.69
  • 82.69
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0000104life cycle
4.00e3
  • 4.00e3
82.69
  • 82.69
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
4.02e3
  • 4.02e3
82.58
  • 82.58
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
4.05e3
  • 4.05e3
82.47
  • 82.47
AEIR
  • AEIR
UBERON:0004180mammary gland fat
  • UBERON:0018241prime adult stage
4.05e3
  • 4.05e3
82.44
  • 82.44
AEIR
  • AEIR
UBERON:0001886choroid plexus
  • UBERON:0018241prime adult stage
4.08e3
  • 4.08e3
82.33
  • 82.33
AEIR
  • AEIR
CL:0000503theca cell
  • UBERON:0018241prime adult stage
4.09e3
  • 4.09e3
82.27
  • 82.27
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
4.16e3
  • 4.16e3
  • 4.76e3
81.96
  • 81.96
  • 79.37
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
4.16e3
  • 4.16e3
81.95
  • 81.95
AEIR
  • AEIR
UBERON:0000056ureter
  • UBERON:0000104life cycle
4.18e3
  • 4.18e3
81.88
  • 81.88
AEIR
  • AEIR
UBERON:0002512corpus luteum
  • UBERON:0000104life cycle
4.24e3
  • 4.24e3
81.61
  • 81.61
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
4.26e3
  • 4.26e3
81.55
  • 81.55
AEIR
  • AEIR
UBERON:0002198neurohypophysis
  • UBERON:0000104life cycle
4.27e3
  • 4.27e3
81.51
  • 81.51
AEIR
  • AEIR
UBERON:0001103diaphragm
  • UBERON:0000104life cycle
4.28e3
  • 4.28e3
81.46
  • 81.46
AEIR
  • AEIR
UBERON:0007358abomasum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
4.29e3
  • 4.29e3
  • 4.33e3
81.43
  • 81.43
  • 81.23
AEIR
  • AEIR
  • AEIR
UBERON:0001158descending colon
  • UBERON:0000104life cycle
4.32e3
  • 4.32e3
81.27
  • 81.27
AEIR
  • AEIR
UBERON:0003126trachea
  • UBERON:0000104life cycle
4.34e3
  • 4.34e3
81.20
  • 81.20
AEIR
  • AEIR
UBERON:0004703dorsal thalamus
  • UBERON:0018241prime adult stage
4.38e3
  • 4.38e3
81.02
  • 81.02
AEIR
  • AEIR
UBERON:0002367prostate gland
  • UBERON:0018241prime adult stage
4.39e3
  • 4.39e3
80.98
  • 80.98
AEIR
  • AEIR
UBERON:0010153rumen papilla
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
4.45e3
  • 4.45e3
  • 4.51e3
80.70
  • 80.70
  • 80.46
AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
4.50e3
  • 4.50e3
  • 4.83e3
80.50
  • 80.50
  • 79.08
AEIR
  • AEIR
  • AEIR
UBERON:0012648ampulla of uterine tube
  • UBERON:0000104life cycle
4.54e3
  • 4.54e3
80.33
  • 80.33
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
4.55e3
  • 4.55e3
80.29
  • 80.29
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
4.60e3
  • 4.60e3
80.07
  • 80.07
AEIR
  • AEIR
UBERON:0002081cardiac atrium
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
4.60e3
  • 4.60e3
  • 4.64e3
80.05
  • 80.05
  • 79.89
AEIR
  • AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0018241prime adult stage
4.61e3
  • 4.61e3
80.04
  • 80.04
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
4.67e3
  • 4.67e3
  • 4.68e3
79.75
  • 79.75
  • 79.73
AEIR
  • AEIR
  • AEIR
UBERON:0001296myometrium
  • UBERON:0000104life cycle
4.73e3
  • 4.73e3
79.49
  • 79.49
AEIR
  • AEIR
UBERON:0003984uterine tube infundibulum
  • UBERON:0000104life cycle
4.80e3
  • 4.80e3
79.21
  • 79.21
AEIR
  • AEIR
UBERON:0001374biceps femoris
  • UBERON:0000104life cycle
4.91e3
  • 4.91e3
78.74
  • 78.74
AEIR
  • AEIR
UBERON:0001381semimembranosus muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
4.98e3
  • 4.98e3
  • 6.04e3
78.41
  • 78.41
  • 73.85
AEIR
  • AEIR
  • AEIR
UBERON:0001375semitendinosus
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
4.99e3
  • 4.99e3
  • 5.73e3
  • 6.02e3
78.38
  • 78.38
  • 75.15
  • 73.90
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0018241prime adult stage
5.11e3
  • 5.11e3
77.85
  • 77.85
AEIR
  • AEIR
UBERON:0002196adenohypophysis
  • UBERON:0000104life cycle
5.15e3
  • 5.15e3
77.70
  • 77.70
AEIR
  • AEIR
UBERON:0002247uterine horn
  • UBERON:0018241prime adult stage
5.29e3
  • 5.29e3
77.07
  • 77.07
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
5.37e3
  • 5.37e3
76.75
  • 76.75
AEIR
  • AEIR
UBERON:0002000gluteal muscle
  • UBERON:0000104life cycle
5.43e3
  • 5.43e3
76.48
  • 76.48
AEIR
  • AEIR
UBERON:0001156ascending colon
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
5.48e3
  • 5.48e3
  • 5.50e3
76.26
  • 76.26
  • 76.16
AEIR
  • AEIR
  • AEIR
UBERON:0002110gall bladder
  • UBERON:0000104life cycle
5.66e3
  • 5.66e3
75.48
  • 75.48
AEIR
  • AEIR
UBERON:0001378rectus femoris
  • UBERON:0000104life cycle
5.67e3
  • 5.67e3
75.44
  • 75.44
AEIR
  • AEIR
UBERON:0001477infraspinatus muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
5.77e3
  • 5.77e3
  • 5.79e3
74.98
  • 74.98
  • 74.90
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
5.79e3
  • 5.79e3
  • 7.18e3
74.90
  • 74.90
  • 68.89
AEIR
  • AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
5.86e3
  • 5.86e3
  • 6.63e3
74.62
  • 74.62
  • 71.27
AEIR
  • AEIR
  • AEIR
UBERON:0007365rumen
  • UBERON:0000112sexually immature stage
5.89e3
  • 5.89e3
74.46
  • 74.46
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0018241prime adult stage
6.01e3
  • 6.01e3
73.96
  • 73.96
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
6.03e3
  • 6.03e3
73.88
  • 73.88
AEIR
  • AEIR
UBERON:0002383supraspinatus muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
6.08e3
  • 6.08e3
  • 6.10e3
73.65
  • 73.65
  • 73.59
AEIR
  • AEIR
  • AEIR
CL:0000711cumulus cell
  • UBERON:0000104life cycle
6.21e3
  • 6.21e3
73.07
  • 73.07
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0018241prime adult stage
6.55e3
  • 6.55e3
71.63
  • 71.63
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000104life cycle
6.55e3
  • 6.55e3
71.60
  • 71.60
AEIR
  • AEIR
UBERON:0001111intercostal muscle
  • UBERON:0000104life cycle
6.88e3
  • 6.88e3
70.20
  • 70.20
AEIR
  • AEIR
UBERON:0001913milk
  • UBERON:0000113post-juvenile adult stage
7.05e3
  • 7.05e3
69.45
  • 69.45
AEIR
  • AEIR
UBERON:0004716conceptus
  • UBERON:0000068embryo stage
7.20e3
  • 7.20e3
68.81
  • 68.81
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
7.37e3
  • 7.37e3
68.06
  • 68.06
AEIR
  • AEIR
UBERON:0015869retropharyngeal lymph node
  • UBERON:0000104life cycle
7.64e3
  • 7.64e3
66.87
  • 66.87
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
1.04e4
  • 1.04e4
55.11
  • 55.11
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria3 species3 genesCompare expression
Boreoeutheria8 species9 genesCompare expression
Theria9 species10 genesCompare expression
Mammalia10 species11 genesCompare expression
Amniota11 species12 genesCompare expression
Tetrapoda12 species13 genesCompare expression
Euteleostomi13 species14 genesCompare expression
Bilateria17 species18 genesCompare expression

Orthology information comes from OMA : ENSBTAG00000008633.

Cross-references

EnsemblENSBTAG00000008633
EMBLBC108108
Uniprot/SWISSPROTQ32PI0, SLX1_BOVIN

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