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B. taurus Gene: PSMB9 - ENSBTAG00000008954 - Bos taurus (cattle)

General information

Ensembl IDENSBTAG00000008954
NamePSMB9
Descriptionproteasome subunit beta 9 [Source:HGNC Symbol;Acc:HGNC:9546]
OrganismBos taurus (cattle)
Synonym(s)beta1i, lmp2, psmb6i, ring12
Orthologs(s)15 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000738leukocyte
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
311
  • 311
  • 339
  • 392
98.66
  • 98.66
  • 98.53
  • 98.31
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
360
  • 360
  • 547
98.44
  • 98.44
  • 97.64
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
416
  • 416
  • 1.33e3
98.20
  • 98.20
  • 94.26
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
422
  • 422
  • 8.35e3
98.18
  • 98.18
  • 63.80
AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
426
  • 426
  • 2.69e3
98.16
  • 98.16
  • 88.34
AEIR
  • AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0018241prime adult stage
450
  • 450
98.05
  • 98.05
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0000104life cycle
473
  • 473
97.95
  • 97.95
AEIR
  • AEIR
UBERON:0001158descending colon
  • UBERON:0000104life cycle
535
  • 535
97.69
  • 97.69
AEIR
  • AEIR
UBERON:0015869retropharyngeal lymph node
  • UBERON:0000104life cycle
585
  • 585
97.47
  • 97.47
AEIR
  • AEIR
UBERON:0001826nasal cavity mucosa
  • UBERON:0000104life cycle
614
  • 614
97.34
  • 97.34
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
618
  • 618
  • 1.06e3
97.33
  • 97.33
  • 95.39
AEIR
  • AEIR
  • AEIR
UBERON:0001103diaphragm
  • UBERON:0000104life cycle
622
  • 622
97.31
  • 97.31
AEIR
  • AEIR
UBERON:0001156ascending colon
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
818
  • 818
  • 829
96.46
  • 96.46
  • 96.41
AEIR
  • AEIR
  • AEIR
UBERON:0002110gall bladder
  • UBERON:0000104life cycle
827
  • 827
96.42
  • 96.42
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
852
  • 852
96.31
  • 96.31
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.02e3
  • 1.02e3
  • 1.87e3
95.57
  • 95.57
  • 91.92
AEIR
  • AEIR
  • AEIR
UBERON:0007358abomasum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.09e3
  • 1.09e3
  • 1.11e3
95.29
  • 95.29
  • 95.19
AEIR
  • AEIR
  • AEIR
UBERON:0005386olfactory segment of nasal mucosa
  • UBERON:0000104life cycle
1.20e3
  • 1.20e3
94.80
  • 94.80
AEIR
  • AEIR
CL:0000503theca cell
  • UBERON:0018241prime adult stage
1.25e3
  • 1.25e3
94.60
  • 94.60
AEIR
  • AEIR
CL:0000775neutrophil
  • UBERON:0018241prime adult stage
1.26e3
  • 1.26e3
94.56
  • 94.56
AEIR
  • AEIR
UBERON:0004703dorsal thalamus
  • UBERON:0018241prime adult stage
1.33e3
  • 1.33e3
94.26
  • 94.26
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.33e3
  • 1.33e3
  • 3.68e3
  • 1.21e4
94.24
  • 94.24
  • 84.05
  • 47.69
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000002uterine cervix
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.67e3
  • 1.67e3
  • 1.69e3
92.76
  • 92.76
  • 92.68
AEIR
  • AEIR
  • AEIR
UBERON:0000051fornix of vagina
  • UBERON:0000104life cycle
2.00e3
  • 2.00e3
91.34
  • 91.34
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
2.14e3
  • 2.14e3
90.74
  • 90.74
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
2.16e3
  • 2.16e3
  • 8.32e3
90.66
  • 90.66
  • 63.96
AEIR
  • AEIR
  • AEIR
UBERON:0004358caput epididymis
  • UBERON:0018241prime adult stage
2.17e3
  • 2.17e3
90.58
  • 90.58
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
2.23e3
  • 2.23e3
  • 4.31e3
  • 4.62e3
  • 4.80e3
90.33
  • 90.33
  • 81.33
  • 79.97
  • 79.22
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0000104life cycle
2.35e3
  • 2.35e3
89.81
  • 89.81
AEIR
  • AEIR
UBERON:0000056ureter
  • UBERON:0000104life cycle
2.53e3
  • 2.53e3
89.06
  • 89.06
AEIR
  • AEIR
UBERON:0000378tongue muscle
  • UBERON:0000104life cycle
2.73e3
  • 2.73e3
88.19
  • 88.19
AEIR
  • AEIR
UBERON:0016632isthmus of fallopian tube
  • UBERON:0000104life cycle
2.87e3
  • 2.87e3
87.57
  • 87.57
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0000104life cycle
2.87e3
  • 2.87e3
87.56
  • 87.56
AEIR
  • AEIR
UBERON:0000057urethra
  • UBERON:0000104life cycle
3.24e3
  • 3.24e3
85.96
  • 85.96
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
3.35e3
  • 3.35e3
  • 4.69e3
85.47
  • 85.47
  • 79.68
AEIR
  • AEIR
  • AEIR
UBERON:0001000vas deferens
  • UBERON:0018241prime adult stage
3.37e3
  • 3.37e3
85.39
  • 85.39
AEIR
  • AEIR
UBERON:0002081cardiac atrium
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
3.41e3
  • 3.41e3
  • 3.44e3
85.22
  • 85.22
  • 85.09
AEIR
  • AEIR
  • AEIR
UBERON:0001913milk
  • UBERON:0000113post-juvenile adult stage
3.61e3
  • 3.61e3
84.36
  • 84.36
AEIR
  • AEIR
UBERON:0001375semitendinosus
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
3.72e3
  • 3.72e3
  • 6.77e3
  • 7.24e3
83.87
  • 83.87
  • 70.64
  • 68.64
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000104life cycle
3.81e3
  • 3.81e3
83.50
  • 83.50
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
4.23e3
  • 4.23e3
  • 4.32e3
  • 6.74e3
  • 1.37e4
81.67
  • 81.67
  • 81.28
  • 70.80
  • 40.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
4.31e3
  • 4.31e3
81.34
  • 81.34
AEIR
  • AEIR
CL:0000711cumulus cell
  • UBERON:0000104life cycle
4.42e3
  • 4.42e3
80.85
  • 80.85
AEIR
  • AEIR
UBERON:0004180mammary gland fat
  • UBERON:0018241prime adult stage
4.56e3
  • 4.56e3
80.26
  • 80.26
AEIR
  • AEIR
UBERON:0002247uterine horn
  • UBERON:0018241prime adult stage
4.70e3
  • 4.70e3
79.62
  • 79.62
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
4.71e3
  • 4.71e3
79.60
  • 79.60
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
4.73e3
  • 4.73e3
79.51
  • 79.51
AEIR
  • AEIR
UBERON:0002367prostate gland
  • UBERON:0018241prime adult stage
4.74e3
  • 4.74e3
79.48
  • 79.48
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0018241prime adult stage
4.75e3
  • 4.75e3
79.42
  • 79.42
AEIR
  • AEIR
UBERON:0001739laryngeal cartilage
  • UBERON:0000104life cycle
4.92e3
  • 4.92e3
78.68
  • 78.68
AEIR
  • AEIR
UBERON:0001886choroid plexus
  • UBERON:0018241prime adult stage
5.08e3
  • 5.08e3
78.00
  • 78.00
AEIR
  • AEIR
UBERON:0007625pigment epithelium of eye
  • UBERON:0000104life cycle
5.44e3
  • 5.44e3
76.43
  • 76.43
AEIR
  • AEIR
UBERON:0003984uterine tube infundibulum
  • UBERON:0000104life cycle
5.53e3
  • 5.53e3
76.02
  • 76.02
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
5.55e3
  • 5.55e3
  • 6.29e3
  • 6.88e3
75.94
  • 75.94
  • 72.72
  • 70.18
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0000104life cycle
5.57e3
  • 5.57e3
75.85
  • 75.85
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
5.92e3
  • 5.92e3
  • 5.94e3
74.35
  • 74.35
  • 74.25
AEIR
  • AEIR
  • AEIR
UBERON:0002383supraspinatus muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
5.96e3
  • 5.96e3
  • 5.97e3
74.15
  • 74.15
  • 74.13
AEIR
  • AEIR
  • AEIR
UBERON:0002198neurohypophysis
  • UBERON:0000104life cycle
6.02e3
  • 6.02e3
73.93
  • 73.93
AEIR
  • AEIR
UBERON:0002512corpus luteum
  • UBERON:0000104life cycle
6.02e3
  • 6.02e3
73.92
  • 73.92
AEIR
  • AEIR
UBERON:0007367surface of tongue
  • UBERON:0000104life cycle
6.12e3
  • 6.12e3
73.50
  • 73.50
AEIR
  • AEIR
UBERON:0007362omasum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
6.16e3
  • 6.16e3
  • 6.31e3
73.30
  • 73.30
  • 72.64
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
6.23e3
  • 6.23e3
73.00
  • 73.00
AEIR
  • AEIR
UBERON:0001477infraspinatus muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
6.41e3
  • 6.41e3
  • 6.44e3
72.20
  • 72.20
  • 72.10
AEIR
  • AEIR
  • AEIR
UBERON:0001296myometrium
  • UBERON:0000104life cycle
6.47e3
  • 6.47e3
71.98
  • 71.98
AEIR
  • AEIR
UBERON:0008285rumen epithelium
  • UBERON:0018241prime adult stage
6.49e3
  • 6.49e3
71.86
  • 71.86
AEIR
  • AEIR
UBERON:0016538temporal cortex
  • UBERON:0000104life cycle
6.52e3
  • 6.52e3
71.76
  • 71.76
AEIR
  • AEIR
UBERON:0010153rumen papilla
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
6.57e3
  • 6.57e3
  • 6.62e3
71.54
  • 71.54
  • 71.32
AEIR
  • AEIR
  • AEIR
UBERON:0012648ampulla of uterine tube
  • UBERON:0000104life cycle
6.59e3
  • 6.59e3
71.43
  • 71.43
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
6.90e3
  • 6.90e3
70.11
  • 70.11
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0000104life cycle
6.95e3
  • 6.95e3
69.90
  • 69.90
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
7.13e3
  • 7.13e3
  • 8.54e3
69.09
  • 69.09
  • 62.98
AEIR
  • AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0018241prime adult stage
7.18e3
  • 7.18e3
68.89
  • 68.89
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0000104life cycle
7.27e3
  • 7.27e3
68.50
  • 68.50
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000104life cycle
7.30e3
  • 7.30e3
68.37
  • 68.37
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
7.37e3
  • 7.37e3
68.05
  • 68.05
AEIR
  • AEIR
UBERON:0007361ruminant reticulum
  • UBERON:0018241prime adult stage
7.38e3
  • 7.38e3
68.04
  • 68.04
AEIR
  • AEIR
UBERON:0001111intercostal muscle
  • UBERON:0000104life cycle
7.85e3
  • 7.85e3
66.00
  • 66.00
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
7.89e3
  • 7.89e3
65.82
  • 65.82
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
7.96e3
  • 7.96e3
  • 1.33e4
65.52
  • 65.52
  • 42.28
AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000104life cycle
8.02e3
  • 8.02e3
65.26
  • 65.26
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
8.23e3
  • 8.23e3
64.32
  • 64.32
AEIR
  • AEIR
UBERON:0001381semimembranosus muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
8.32e3
  • 8.32e3
  • 9.53e3
63.95
  • 63.95
  • 58.68
AEIR
  • AEIR
  • AEIR
UBERON:0003126trachea
  • UBERON:0000104life cycle
8.38e3
  • 8.38e3
63.66
  • 63.66
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
8.59e3
  • 8.59e3
  • 8.85e3
62.75
  • 62.75
  • 61.64
AEIR
  • AEIR
  • AEIR
UBERON:0001378rectus femoris
  • UBERON:0000104life cycle
8.79e3
  • 8.79e3
61.90
  • 61.90
AEIR
  • AEIR
UBERON:0002196adenohypophysis
  • UBERON:0000104life cycle
8.83e3
  • 8.83e3
61.74
  • 61.74
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
9.68e3
  • 9.68e3
58.05
  • 58.05
AEIR
  • AEIR
UBERON:0001374biceps femoris
  • UBERON:0000104life cycle
9.92e3
  • 9.92e3
57.01
  • 57.01
AEIR
  • AEIR
UBERON:0004716conceptus
  • UBERON:0000068embryo stage
1.01e4
  • 1.01e4
56.04
  • 56.04
AEIR
  • AEIR
UBERON:0003309floor plate of diencephalon
  • UBERON:0018241prime adult stage
1.04e4
  • 1.04e4
54.81
  • 54.81
AEIR
  • AEIR
UBERON:0007365rumen
  • UBERON:0000112sexually immature stage
1.04e4
  • 1.04e4
54.77
  • 54.77
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000068embryo stage
1.11e4
  • 1.11e4
51.82
  • 51.82
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.13e4
  • 1.13e4
50.86
  • 50.86
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.19e4
  • 1.19e4
48.43
  • 48.43
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0018241prime adult stage
1.25e4
  • 1.25e4
45.93
  • 45.93
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.48e4
  • 1.48e4
35.86
  • 35.86
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression

Orthology information comes from OMA : ENSBTAG00000008954.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota1 geneCompare expression

Paralogy information comes from OMA : ENSBTAG00000008954.

Cross-references

EnsemblENSBTAG00000008954 (PSMB9)
HGNCHGNC:9546 (PSMB9)
EMBLAY957499, BC102963
Uniprot/SWISSPROTPSB9_BOVIN, Q3SZC2

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