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B. taurus Gene: GABRR1 - ENSBTAG00000011672 - Bos taurus (cattle)

General information

Ensembl IDENSBTAG00000011672
NameGABRR1
Descriptiongamma-aminobutyric acid (GABA) A receptor, rho 1 [Source:HGNC Symbol;Acc:HGNC:4090]
OrganismBos taurus (cattle)
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • UBERON:0000104life cycle
3.54e3
  • 3.54e3
84.66
  • 84.66
AEIR
  • AEIR
UBERON:0001886choroid plexus
  • UBERON:0018241prime adult stage
6.95e3
  • 6.95e3
69.87
  • 69.87
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
9.26e3
  • 9.26e3
  • 9.27e3
59.86
  • 59.86
  • 59.81
AEIR
  • AEIR
  • AEIR
UBERON:0002383supraspinatus muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.02e4
  • 1.02e4
  • 1.03e4
55.60
  • 55.60
  • 55.48
AEIR
  • AEIR
  • AEIR
UBERON:0007625pigment epithelium of eye
  • UBERON:0000104life cycle
1.02e4
  • 1.02e4
55.59
  • 55.59
AEIR
  • AEIR
UBERON:0001381semimembranosus muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.06e4
  • 1.06e4
  • 1.13e4
54.02
  • 54.02
  • 50.89
AEIR
  • AEIR
  • AEIR
UBERON:0001739laryngeal cartilage
  • UBERON:0000104life cycle
1.07e4
  • 1.07e4
53.47
  • 53.47
AEIR
  • AEIR
UBERON:0001375semitendinosus
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.12e4
  • 1.12e4
  • 1.33e4
  • 1.35e4
51.27
  • 51.27
  • 42.26
  • 41.68
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000104life cycle
1.13e4
  • 1.13e4
51.22
  • 51.22
AEIR
  • AEIR
UBERON:0001378rectus femoris
  • UBERON:0000104life cycle
1.14e4
  • 1.14e4
50.64
  • 50.64
AEIR
  • AEIR
UBERON:0001477infraspinatus muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.19e4
  • 1.19e4
  • 1.19e4
48.53
  • 48.53
  • 48.53
AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.21e4
  • 1.21e4
  • 1.49e4
  • 1.65e4
47.69
  • 47.69
  • 35.31
  • 28.53
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001826nasal cavity mucosa
  • UBERON:0000104life cycle
1.22e4
  • 1.22e4
46.92
  • 46.92
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.24e4
  • 1.24e4
  • 1.33e4
46.38
  • 46.38
  • 42.53
AEIR
  • AEIR
  • AEIR
UBERON:0000378tongue muscle
  • UBERON:0000104life cycle
1.24e4
  • 1.24e4
46.21
  • 46.21
AEIR
  • AEIR
UBERON:0001156ascending colon
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.26e4
  • 1.26e4
  • 1.26e4
45.53
  • 45.53
  • 45.49
AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
45.46
  • 45.46
AEIR
  • AEIR
UBERON:0002512corpus luteum
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
45.18
  • 45.18
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000104life cycle
1.33e4
  • 1.33e4
42.49
  • 42.49
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.33e4
  • 1.33e4
  • 1.36e4
42.24
  • 42.24
  • 41.03
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.34e4
  • 1.34e4
  • 1.57e4
41.98
  • 41.98
  • 31.83
AEIR
  • AEIR
  • AEIR
UBERON:0001111intercostal muscle
  • UBERON:0000104life cycle
1.35e4
  • 1.35e4
41.57
  • 41.57
AEIR
  • AEIR
UBERON:0003984uterine tube infundibulum
  • UBERON:0000104life cycle
1.36e4
  • 1.36e4
41.27
  • 41.27
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0018241prime adult stage
1.36e4
  • 1.36e4
41.20
  • 41.20
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0000104life cycle
1.37e4
  • 1.37e4
40.60
  • 40.60
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.39e4
  • 1.39e4
39.85
  • 39.85
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0000104life cycle
1.40e4
  • 1.40e4
39.18
  • 39.18
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
38.85
  • 38.85
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.42e4
  • 1.42e4
38.42
  • 38.42
AEIR
  • AEIR
UBERON:0007358abomasum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.44e4
  • 1.44e4
  • 1.44e4
37.52
  • 37.52
  • 37.49
AEIR
  • AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0000104life cycle
1.44e4
  • 1.44e4
37.45
  • 37.45
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.48e4
  • 1.48e4
  • 1.49e4
35.77
  • 35.77
  • 35.49
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000068embryo stage
1.49e4
  • 1.49e4
35.54
  • 35.54
AEIR
  • AEIR
UBERON:0002507abdominal lymph node
  • UBERON:0018241prime adult stage
1.49e4
  • 1.49e4
35.39
  • 35.39
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.50e4
  • 1.50e4
34.81
  • 34.81
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.51e4
  • 1.51e4
  • 1.59e4
34.43
  • 34.43
  • 30.98
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
1.51e4
  • 1.51e4
34.42
  • 34.42
AEIR
  • AEIR
UBERON:0003309floor plate of diencephalon
  • UBERON:0018241prime adult stage
1.54e4
  • 1.54e4
33.47
  • 33.47
AEIR
  • AEIR
UBERON:0002198neurohypophysis
  • UBERON:0000104life cycle
1.54e4
  • 1.54e4
33.08
  • 33.08
AEIR
  • AEIR
UBERON:0001913milk
  • UBERON:0000113post-juvenile adult stage
1.54e4
  • 1.54e4
33.04
  • 33.04
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.55e4
  • 1.55e4
32.62
  • 32.62
AEIR
  • AEIR
UBERON:0002110gall bladder
  • UBERON:0000104life cycle
1.56e4
  • 1.56e4
32.18
  • 32.18
AEIR
  • AEIR
UBERON:0012648ampulla of uterine tube
  • UBERON:0000104life cycle
1.57e4
  • 1.57e4
31.95
  • 31.95
AEIR
  • AEIR
UBERON:0005386olfactory segment of nasal mucosa
  • UBERON:0000104life cycle
1.57e4
  • 1.57e4
31.84
  • 31.84
AEIR
  • AEIR
UBERON:0002247uterine horn
  • UBERON:0018241prime adult stage
1.58e4
  • 1.58e4
31.66
  • 31.66
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.63e4
  • 1.63e4
  • 2.04e4
29.30
  • 29.30
  • 11.51
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.66e4
  • 1.66e4
  • 1.69e4
  • 1.71e4
28.22
  • 28.22
  • 26.59
  • 25.97
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.66e4
  • 1.66e4
  • 1.77e4
28.02
  • 28.02
  • 23.10
AEIR
  • AEIR
  • AEIR
CL:0000503theca cell
  • UBERON:0018241prime adult stage
1.81e4
  • 1.81e4
21.35
  • 21.35
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression

Orthology information comes from OMA : ENSBTAG00000011672.

Cross-references

EnsemblENSBTAG00000011672 (GABRR1)
HGNCHGNC:4090 (GABRR1)
EMBLDAAA02026450
Uniprot/SPTREMBLE1BCQ5, E1BCQ5_BOVIN

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