B. taurus Gene: ZNF541 - ENSBTAG00000012606 - Bos taurus (cattle)

General information

Ensembl IDENSBTAG00000012606
NameZNF541
Descriptionzinc finger protein 541 [Source:HGNC Symbol;Acc:HGNC:25294]
OrganismBos taurus (cattle)
Synonym(s)dkfzp434i1930
Orthologs(s)12 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
3.53e3
  • 3.53e3
  • 4.45e3
  • 1.14e4
  • 1.37e4
84.70
  • 84.70
  • 80.72
  • 50.50
  • 40.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
4.38e3
  • 4.38e3
81.02
  • 81.02
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
4.63e3
  • 4.63e3
79.92
  • 79.92
AEIR
  • AEIR
UBERON:0004703dorsal thalamus
  • UBERON:0018241prime adult stage
1.25e4
  • 1.25e4
46.01
  • 46.01
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.35e4
  • 1.35e4
41.36
  • 41.36
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0000104life cycle
1.35e4
  • 1.35e4
41.32
  • 41.32
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.38e4
  • 1.38e4
  • 1.51e4
40.30
  • 40.30
  • 34.74
AEIR
  • AEIR
  • AEIR
UBERON:0004358caput epididymis
  • UBERON:0018241prime adult stage
1.43e4
  • 1.43e4
38.23
  • 38.23
AEIR
  • AEIR
UBERON:0016538temporal cortex
  • UBERON:0000104life cycle
1.44e4
  • 1.44e4
37.48
  • 37.48
AEIR
  • AEIR
UBERON:0003309floor plate of diencephalon
  • UBERON:0018241prime adult stage
1.47e4
  • 1.47e4
36.44
  • 36.44
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000068embryo stage
1.51e4
  • 1.51e4
34.41
  • 34.41
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.58e4
  • 1.58e4
  • 1.76e4
31.33
  • 31.33
  • 23.79
AEIR
  • AEIR
  • AEIR
UBERON:0002247uterine horn
  • UBERON:0018241prime adult stage
1.59e4
  • 1.59e4
31.05
  • 31.05
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000104life cycle
1.67e4
  • 1.67e4
27.80
  • 27.80
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria3 species3 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Theria11 species11 genesCompare expression
Amniota12 species12 genesCompare expression

Orthology information comes from OMA : ENSBTAG00000012606.

Cross-references

EnsemblENSBTAG00000012606 (ZNF541)
HGNCHGNC:25294 (ZNF541)
EMBLDAAA02047419
Uniprot/SPTREMBLE1BF07, E1BF07_BOVIN, F1MLU0, F1MLU0_BOVIN

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