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B. taurus Gene: PMCH - ENSBTAG00000013008 - Bos taurus (cattle)

General information

Ensembl IDENSBTAG00000013008
NamePMCH
Descriptionpro-melanin concentrating hormone [Source:HGNC Symbol;Acc:HGNC:9109]
OrganismBos taurus (cattle)
Synonym(s)mch
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004716conceptus
  • UBERON:0000068embryo stage
5.01e3
  • 5.01e3
78.29
  • 78.29
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
6.28e3
  • 6.28e3
72.78
  • 72.78
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
7.34e3
  • 7.34e3
  • 1.01e4
68.19
  • 68.19
  • 56.13
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
7.67e3
  • 7.67e3
66.74
  • 66.74
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000104life cycle
9.49e3
  • 9.49e3
58.87
  • 58.87
AEIR
  • AEIR
UBERON:0001103diaphragm
  • UBERON:0000104life cycle
9.74e3
  • 9.74e3
57.77
  • 57.77
AEIR
  • AEIR
UBERON:0002367prostate gland
  • UBERON:0018241prime adult stage
9.78e3
  • 9.78e3
57.62
  • 57.62
AEIR
  • AEIR
UBERON:0004703dorsal thalamus
  • UBERON:0018241prime adult stage
9.89e3
  • 9.89e3
57.13
  • 57.13
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0018241prime adult stage
9.94e3
  • 9.94e3
56.93
  • 56.93
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000068embryo stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.02e4
  • 1.02e4
  • 1.35e4
  • 1.38e4
  • 1.39e4
55.98
  • 55.98
  • 41.43
  • 40.15
  • 39.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0000104life cycle
1.02e4
  • 1.02e4
55.59
  • 55.59
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
  • 1.27e4
55.27
  • 55.27
  • 44.93
AEIR
  • AEIR
  • AEIR
UBERON:0015869retropharyngeal lymph node
  • UBERON:0000104life cycle
1.04e4
  • 1.04e4
54.94
  • 54.94
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.04e4
  • 1.04e4
  • 1.39e4
54.85
  • 54.85
  • 39.87
AEIR
  • AEIR
  • AEIR
UBERON:0007367surface of tongue
  • UBERON:0000104life cycle
1.04e4
  • 1.04e4
54.82
  • 54.82
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0000104life cycle
1.09e4
  • 1.09e4
52.75
  • 52.75
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.10e4
  • 1.10e4
  • 1.22e4
52.35
  • 52.35
  • 47.15
AEIR
  • AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.11e4
  • 1.11e4
  • 1.55e4
  • 1.66e4
51.92
  • 51.92
  • 32.92
  • 27.97
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
1.11e4
  • 1.11e4
51.78
  • 51.78
AEIR
  • AEIR
UBERON:0007358abomasum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.12e4
  • 1.12e4
  • 1.12e4
51.52
  • 51.52
  • 51.40
AEIR
  • AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000104life cycle
1.12e4
  • 1.12e4
51.37
  • 51.37
AEIR
  • AEIR
CL:0000775neutrophil
  • UBERON:0018241prime adult stage
1.13e4
  • 1.13e4
51.17
  • 51.17
AEIR
  • AEIR
UBERON:0004358caput epididymis
  • UBERON:0018241prime adult stage
1.14e4
  • 1.14e4
50.70
  • 50.70
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.14e4
  • 1.14e4
  • 1.37e4
  • 1.37e4
50.69
  • 50.69
  • 40.66
  • 40.61
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
50.21
  • 50.21
AEIR
  • AEIR
UBERON:0002110gall bladder
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
49.97
  • 49.97
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
1.16e4
  • 1.16e4
49.62
  • 49.62
AEIR
  • AEIR
UBERON:0008285rumen epithelium
  • UBERON:0018241prime adult stage
1.18e4
  • 1.18e4
48.98
  • 48.98
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.18e4
  • 1.18e4
48.74
  • 48.74
AEIR
  • AEIR
UBERON:0001375semitendinosus
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.19e4
  • 1.19e4
  • 1.19e4
  • 1.54e4
48.40
  • 48.40
  • 48.38
  • 33.06
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.20e4
  • 1.20e4
48.13
  • 48.13
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.21e4
  • 1.21e4
  • 1.58e4
  • 1.59e4
47.69
  • 47.69
  • 31.37
  • 31.22
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0018241prime adult stage
1.22e4
  • 1.22e4
47.22
  • 47.22
AEIR
  • AEIR
UBERON:0001000vas deferens
  • UBERON:0018241prime adult stage
1.22e4
  • 1.22e4
47.19
  • 47.19
AEIR
  • AEIR
UBERON:0007362omasum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.23e4
  • 1.23e4
  • 1.24e4
46.90
  • 46.90
  • 46.05
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.23e4
  • 1.23e4
46.64
  • 46.64
AEIR
  • AEIR
UBERON:0016538temporal cortex
  • UBERON:0000104life cycle
1.24e4
  • 1.24e4
46.43
  • 46.43
AEIR
  • AEIR
UBERON:0002247uterine horn
  • UBERON:0018241prime adult stage
1.25e4
  • 1.25e4
45.82
  • 45.82
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.26e4
  • 1.26e4
45.55
  • 45.55
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
45.41
  • 45.41
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.27e4
  • 1.27e4
  • 1.41e4
44.89
  • 44.89
  • 38.90
AEIR
  • AEIR
  • AEIR
UBERON:0001296myometrium
  • UBERON:0000104life cycle
1.28e4
  • 1.28e4
44.74
  • 44.74
AEIR
  • AEIR
UBERON:0003126trachea
  • UBERON:0000104life cycle
1.28e4
  • 1.28e4
44.48
  • 44.48
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
1.29e4
  • 1.29e4
44.30
  • 44.30
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0000104life cycle
1.29e4
  • 1.29e4
44.05
  • 44.05
AEIR
  • AEIR
UBERON:0002198neurohypophysis
  • UBERON:0000104life cycle
1.31e4
  • 1.31e4
43.22
  • 43.22
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000068embryo stage
1.32e4
  • 1.32e4
42.91
  • 42.91
AEIR
  • AEIR
CL:0000503theca cell
  • UBERON:0018241prime adult stage
1.33e4
  • 1.33e4
42.49
  • 42.49
AEIR
  • AEIR
UBERON:0000056ureter
  • UBERON:0000104life cycle
1.33e4
  • 1.33e4
42.40
  • 42.40
AEIR
  • AEIR
UBERON:0001913milk
  • UBERON:0000113post-juvenile adult stage
1.33e4
  • 1.33e4
42.17
  • 42.17
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.34e4
  • 1.34e4
  • 1.36e4
42.07
  • 42.07
  • 41.19
AEIR
  • AEIR
  • AEIR
UBERON:0002196adenohypophysis
  • UBERON:0000104life cycle
1.37e4
  • 1.37e4
40.59
  • 40.59
AEIR
  • AEIR
UBERON:0016632isthmus of fallopian tube
  • UBERON:0000104life cycle
1.37e4
  • 1.37e4
40.42
  • 40.42
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.38e4
  • 1.38e4
40.09
  • 40.09
AEIR
  • AEIR
CL:0000711cumulus cell
  • UBERON:0000104life cycle
1.39e4
  • 1.39e4
39.61
  • 39.61
AEIR
  • AEIR
UBERON:0004180mammary gland fat
  • UBERON:0018241prime adult stage
1.40e4
  • 1.40e4
39.27
  • 39.27
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
38.94
  • 38.94
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0018241prime adult stage
1.41e4
  • 1.41e4
38.77
  • 38.77
AEIR
  • AEIR
UBERON:0007365rumen
  • UBERON:0000112sexually immature stage
1.42e4
  • 1.42e4
38.47
  • 38.47
AEIR
  • AEIR
UBERON:0007361ruminant reticulum
  • UBERON:0018241prime adult stage
1.42e4
  • 1.42e4
38.34
  • 38.34
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
1.42e4
  • 1.42e4
38.29
  • 38.29
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
1.43e4
  • 1.43e4
38.19
  • 38.19
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.43e4
  • 1.43e4
  • 1.56e4
38.09
  • 38.09
  • 32.48
AEIR
  • AEIR
  • AEIR
UBERON:0007625pigment epithelium of eye
  • UBERON:0000104life cycle
1.44e4
  • 1.44e4
37.41
  • 37.41
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.45e4
  • 1.45e4
  • 1.60e4
  • 1.67e4
37.25
  • 37.25
  • 30.60
  • 27.73
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000057urethra
  • UBERON:0000104life cycle
1.48e4
  • 1.48e4
35.69
  • 35.69
AEIR
  • AEIR
UBERON:0005386olfactory segment of nasal mucosa
  • UBERON:0000104life cycle
1.51e4
  • 1.51e4
34.65
  • 34.65
AEIR
  • AEIR
UBERON:0003309floor plate of diencephalon
  • UBERON:0018241prime adult stage
1.52e4
  • 1.52e4
34.28
  • 34.28
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.55e4
  • 1.55e4
  • 1.79e4
32.80
  • 32.80
  • 22.56
AEIR
  • AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0018241prime adult stage
1.56e4
  • 1.56e4
32.43
  • 32.43
AEIR
  • AEIR
UBERON:0003984uterine tube infundibulum
  • UBERON:0000104life cycle
1.56e4
  • 1.56e4
32.28
  • 32.28
AEIR
  • AEIR
UBERON:0001111intercostal muscle
  • UBERON:0000104life cycle
1.59e4
  • 1.59e4
30.87
  • 30.87
AEIR
  • AEIR
UBERON:0001381semimembranosus muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.67e4
  • 1.67e4
  • 1.92e4
27.69
  • 27.69
  • 16.80
AEIR
  • AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.70e4
  • 1.70e4
  • 1.74e4
26.33
  • 26.33
  • 24.40
AEIR
  • AEIR
  • AEIR
UBERON:0012648ampulla of uterine tube
  • UBERON:0000104life cycle
1.72e4
  • 1.72e4
25.38
  • 25.38
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0000104life cycle
1.79e4
  • 1.79e4
22.48
  • 22.48
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.87e4
  • 1.87e4
19.13
  • 19.13
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression

Orthology information comes from OMA : ENSBTAG00000013008.

Cross-references

EnsemblENSBTAG00000013008 (PMCH)
HGNCHGNC:9109 (PMCH)
EMBLDAAA02013696, DQ499531, EF175214
Uniprot/SPTREMBLA1Z2Z3, A1Z2Z3_BOVIN

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