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B. taurus Gene: RBM42 - ENSBTAG00000013440 - Bos taurus (cattle)

General information

Ensembl IDENSBTAG00000013440
NameRBM42
DescriptionRNA binding motif protein 42 [Source:HGNC Symbol;Acc:HGNC:28117]
OrganismBos taurus (cattle)
Synonym(s)mgc10433
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
892
  • 892
  • 1.91e3
  • 2.24e3
  • 2.46e3
96.14
  • 96.14
  • 91.71
  • 90.31
  • 89.34
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.00e3
  • 1.00e3
95.66
  • 95.66
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0000104life cycle
1.08e3
  • 1.08e3
95.31
  • 95.31
AEIR
  • AEIR
UBERON:0001000vas deferens
  • UBERON:0018241prime adult stage
1.09e3
  • 1.09e3
95.28
  • 95.28
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.12e3
  • 1.12e3
  • 2.69e3
95.13
  • 95.13
  • 88.36
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.14e3
  • 1.14e3
95.05
  • 95.05
AEIR
  • AEIR
UBERON:0016632isthmus of fallopian tube
  • UBERON:0000104life cycle
1.16e3
  • 1.16e3
94.96
  • 94.96
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0000104life cycle
1.19e3
  • 1.19e3
94.86
  • 94.86
AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.19e3
  • 1.19e3
  • 1.37e3
  • 1.59e3
94.84
  • 94.84
  • 94.07
  • 93.13
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001739laryngeal cartilage
  • UBERON:0000104life cycle
1.20e3
  • 1.20e3
94.79
  • 94.79
AEIR
  • AEIR
UBERON:0003126trachea
  • UBERON:0000104life cycle
1.29e3
  • 1.29e3
94.43
  • 94.43
AEIR
  • AEIR
UBERON:0001826nasal cavity mucosa
  • UBERON:0000104life cycle
1.29e3
  • 1.29e3
94.40
  • 94.40
AEIR
  • AEIR
UBERON:0007625pigment epithelium of eye
  • UBERON:0000104life cycle
1.35e3
  • 1.35e3
94.15
  • 94.15
AEIR
  • AEIR
UBERON:0001296myometrium
  • UBERON:0000104life cycle
1.44e3
  • 1.44e3
93.78
  • 93.78
AEIR
  • AEIR
UBERON:0016538temporal cortex
  • UBERON:0000104life cycle
1.45e3
  • 1.45e3
93.73
  • 93.73
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.46e3
  • 1.46e3
  • 4.31e3
93.68
  • 93.68
  • 81.34
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.48e3
  • 1.48e3
93.59
  • 93.59
AEIR
  • AEIR
UBERON:0000056ureter
  • UBERON:0000104life cycle
1.52e3
  • 1.52e3
93.44
  • 93.44
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.52e3
  • 1.52e3
  • 3.93e3
93.41
  • 93.41
  • 82.97
AEIR
  • AEIR
  • AEIR
UBERON:0002196adenohypophysis
  • UBERON:0000104life cycle
1.55e3
  • 1.55e3
93.29
  • 93.29
AEIR
  • AEIR
UBERON:0002198neurohypophysis
  • UBERON:0000104life cycle
1.61e3
  • 1.61e3
93.02
  • 93.02
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0000104life cycle
1.66e3
  • 1.66e3
92.80
  • 92.80
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.67e3
  • 1.67e3
  • 2.46e3
92.76
  • 92.76
  • 89.32
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.68e3
  • 1.68e3
  • 2.47e3
92.73
  • 92.73
  • 89.29
AEIR
  • AEIR
  • AEIR
UBERON:0003309floor plate of diencephalon
  • UBERON:0018241prime adult stage
1.74e3
  • 1.74e3
92.47
  • 92.47
AEIR
  • AEIR
UBERON:0000002uterine cervix
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.77e3
  • 1.77e3
  • 1.78e3
92.34
  • 92.34
  • 92.31
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.79e3
  • 1.79e3
  • 2.54e3
92.23
  • 92.23
  • 88.99
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
1.81e3
  • 1.81e3
92.18
  • 92.18
AEIR
  • AEIR
UBERON:0004703dorsal thalamus
  • UBERON:0018241prime adult stage
1.85e3
  • 1.85e3
92.01
  • 92.01
AEIR
  • AEIR
UBERON:0000051fornix of vagina
  • UBERON:0000104life cycle
1.87e3
  • 1.87e3
91.89
  • 91.89
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0000104life cycle
1.87e3
  • 1.87e3
91.89
  • 91.89
AEIR
  • AEIR
UBERON:0010153rumen papilla
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.88e3
  • 1.88e3
  • 1.92e3
91.84
  • 91.84
  • 91.66
AEIR
  • AEIR
  • AEIR
UBERON:0004180mammary gland fat
  • UBERON:0018241prime adult stage
1.89e3
  • 1.89e3
91.82
  • 91.82
AEIR
  • AEIR
UBERON:0000378tongue muscle
  • UBERON:0000104life cycle
1.89e3
  • 1.89e3
91.80
  • 91.80
AEIR
  • AEIR
UBERON:0000057urethra
  • UBERON:0000104life cycle
1.91e3
  • 1.91e3
91.73
  • 91.73
AEIR
  • AEIR
UBERON:0007367surface of tongue
  • UBERON:0000104life cycle
1.93e3
  • 1.93e3
91.66
  • 91.66
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.93e3
  • 1.93e3
91.63
  • 91.63
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0018241prime adult stage
1.93e3
  • 1.93e3
91.62
  • 91.62
AEIR
  • AEIR
UBERON:0001158descending colon
  • UBERON:0000104life cycle
1.99e3
  • 1.99e3
91.37
  • 91.37
AEIR
  • AEIR
UBERON:0002367prostate gland
  • UBERON:0018241prime adult stage
2.01e3
  • 2.01e3
91.30
  • 91.30
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
2.02e3
  • 2.02e3
91.25
  • 91.25
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000068embryo stage
2.03e3
  • 2.03e3
91.22
  • 91.22
AEIR
  • AEIR
UBERON:0001374biceps femoris
  • UBERON:0000104life cycle
2.04e3
  • 2.04e3
91.18
  • 91.18
AEIR
  • AEIR
CL:0000503theca cell
  • UBERON:0018241prime adult stage
2.06e3
  • 2.06e3
91.09
  • 91.09
AEIR
  • AEIR
UBERON:0001156ascending colon
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.11e3
  • 2.11e3
  • 2.13e3
90.88
  • 90.88
  • 90.78
AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.14e3
  • 2.14e3
  • 4.07e3
90.75
  • 90.75
  • 82.35
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.16e3
  • 2.16e3
  • 3.39e3
90.64
  • 90.64
  • 85.33
AEIR
  • AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0018241prime adult stage
2.19e3
  • 2.19e3
90.50
  • 90.50
AEIR
  • AEIR
UBERON:0005386olfactory segment of nasal mucosa
  • UBERON:0000104life cycle
2.20e3
  • 2.20e3
90.45
  • 90.45
AEIR
  • AEIR
UBERON:0001886choroid plexus
  • UBERON:0018241prime adult stage
2.22e3
  • 2.22e3
90.38
  • 90.38
AEIR
  • AEIR
UBERON:0002512corpus luteum
  • UBERON:0000104life cycle
2.24e3
  • 2.24e3
90.30
  • 90.30
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000104life cycle
2.29e3
  • 2.29e3
90.08
  • 90.08
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
2.30e3
  • 2.30e3
90.05
  • 90.05
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000104life cycle
2.32e3
  • 2.32e3
89.97
  • 89.97
AEIR
  • AEIR
UBERON:0007361ruminant reticulum
  • UBERON:0018241prime adult stage
2.36e3
  • 2.36e3
89.78
  • 89.78
AEIR
  • AEIR
UBERON:0001103diaphragm
  • UBERON:0000104life cycle
2.44e3
  • 2.44e3
89.41
  • 89.41
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000104life cycle
2.45e3
  • 2.45e3
89.41
  • 89.41
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0000104life cycle
2.52e3
  • 2.52e3
89.08
  • 89.08
AEIR
  • AEIR
UBERON:0002081cardiac atrium
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.52e3
  • 2.52e3
  • 2.57e3
89.07
  • 89.07
  • 88.87
AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.53e3
  • 2.53e3
  • 2.85e3
89.04
  • 89.04
  • 87.65
AEIR
  • AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.53e3
  • 2.53e3
  • 4.51e3
89.02
  • 89.02
  • 80.45
AEIR
  • AEIR
  • AEIR
UBERON:0002383supraspinatus muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.57e3
  • 2.57e3
  • 2.57e3
88.88
  • 88.88
  • 88.85
AEIR
  • AEIR
  • AEIR
UBERON:0015869retropharyngeal lymph node
  • UBERON:0000104life cycle
2.57e3
  • 2.57e3
88.87
  • 88.87
AEIR
  • AEIR
UBERON:0001381semimembranosus muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.58e3
  • 2.58e3
  • 3.09e3
88.84
  • 88.84
  • 86.63
AEIR
  • AEIR
  • AEIR
UBERON:0001477infraspinatus muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.59e3
  • 2.59e3
  • 2.61e3
88.79
  • 88.79
  • 88.69
AEIR
  • AEIR
  • AEIR
UBERON:0004358caput epididymis
  • UBERON:0018241prime adult stage
2.60e3
  • 2.60e3
88.73
  • 88.73
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
2.61e3
  • 2.61e3
88.70
  • 88.70
AEIR
  • AEIR
UBERON:0003984uterine tube infundibulum
  • UBERON:0000104life cycle
2.61e3
  • 2.61e3
88.70
  • 88.70
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
2.61e3
  • 2.61e3
88.70
  • 88.70
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.63e3
  • 2.63e3
  • 2.66e3
88.59
  • 88.59
  • 88.46
AEIR
  • AEIR
  • AEIR
UBERON:0012648ampulla of uterine tube
  • UBERON:0000104life cycle
2.64e3
  • 2.64e3
88.55
  • 88.55
AEIR
  • AEIR
UBERON:0007362omasum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.65e3
  • 2.65e3
  • 2.66e3
88.54
  • 88.54
  • 88.47
AEIR
  • AEIR
  • AEIR
UBERON:0001378rectus femoris
  • UBERON:0000104life cycle
2.66e3
  • 2.66e3
88.47
  • 88.47
AEIR
  • AEIR
UBERON:0001375semitendinosus
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.75e3
  • 2.75e3
  • 2.77e3
  • 3.05e3
88.10
  • 88.10
  • 87.99
  • 86.78
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007358abomasum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.75e3
  • 2.75e3
  • 2.78e3
88.10
  • 88.10
  • 87.96
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.75e3
  • 2.75e3
  • 3.83e3
88.08
  • 88.08
  • 83.39
AEIR
  • AEIR
  • AEIR
CL:0000711cumulus cell
  • UBERON:0000104life cycle
2.83e3
  • 2.83e3
87.76
  • 87.76
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
2.85e3
  • 2.85e3
87.67
  • 87.67
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
2.86e3
  • 2.86e3
  • 3.57e3
  • 8.01e3
  • 1.37e4
87.63
  • 87.63
  • 84.53
  • 65.30
  • 40.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
3.04e3
  • 3.04e3
86.85
  • 86.85
AEIR
  • AEIR
CL:0000775neutrophil
  • UBERON:0018241prime adult stage
3.15e3
  • 3.15e3
86.33
  • 86.33
AEIR
  • AEIR
UBERON:0002247uterine horn
  • UBERON:0018241prime adult stage
3.18e3
  • 3.18e3
86.21
  • 86.21
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
3.22e3
  • 3.22e3
  • 3.81e3
  • 4.05e3
86.05
  • 86.05
  • 83.50
  • 82.47
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0000104life cycle
3.33e3
  • 3.33e3
85.56
  • 85.56
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
3.52e3
  • 3.52e3
84.76
  • 84.76
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
3.53e3
  • 3.53e3
84.71
  • 84.71
AEIR
  • AEIR
UBERON:0002110gall bladder
  • UBERON:0000104life cycle
3.58e3
  • 3.58e3
84.47
  • 84.47
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0018241prime adult stage
3.60e3
  • 3.60e3
84.38
  • 84.38
AEIR
  • AEIR
UBERON:0001111intercostal muscle
  • UBERON:0000104life cycle
3.83e3
  • 3.83e3
83.40
  • 83.40
AEIR
  • AEIR
UBERON:0004716conceptus
  • UBERON:0000068embryo stage
3.93e3
  • 3.93e3
82.99
  • 82.99
AEIR
  • AEIR
UBERON:0001913milk
  • UBERON:0000113post-juvenile adult stage
4.04e3
  • 4.04e3
82.48
  • 82.48
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0018241prime adult stage
4.35e3
  • 4.35e3
81.13
  • 81.13
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
4.50e3
  • 4.50e3
80.52
  • 80.52
AEIR
  • AEIR
UBERON:0007365rumen
  • UBERON:0000112sexually immature stage
5.00e3
  • 5.00e3
78.32
  • 78.32
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
5.86e3
  • 5.86e3
74.59
  • 74.59
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
6.55e3
  • 6.55e3
71.61
  • 71.61
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria3 species3 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Amniota13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression

Orthology information comes from OMA : ENSBTAG00000013440.

Cross-references

EnsemblENSBTAG00000013440 (RBM42)
HGNCHGNC:28117 (RBM42)
EMBLDAAA02046949
Uniprot/SPTREMBLF1N7X9, F1N7X9_BOVIN

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