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B. taurus Gene: SLC22A6 - ENSBTAG00000013642 - Bos taurus (cattle)

General information

Ensembl IDENSBTAG00000013642
NameSLC22A6
Descriptionsolute carrier family 22 (organic anion transporter), member 6 [Source:HGNC Symbol;Acc:HGNC:10970]
OrganismBos taurus (cattle)
Synonym(s)oat1, paht, roat1
Orthologs(s)18 orthologs
Paralog(s)34 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
116
  • 116
99.50
  • 99.50
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
161
  • 161
99.30
  • 99.30
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0000104life cycle
5.99e3
  • 5.99e3
74.04
  • 74.04
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
6.64e3
  • 6.64e3
71.24
  • 71.24
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
6.97e3
  • 6.97e3
69.78
  • 69.78
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
7.44e3
  • 7.44e3
  • 1.20e4
67.76
  • 67.76
  • 48.17
AEIR
  • AEIR
  • AEIR
UBERON:0003309floor plate of diencephalon
  • UBERON:0018241prime adult stage
8.30e3
  • 8.30e3
64.02
  • 64.02
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0000104life cycle
8.46e3
  • 8.46e3
63.34
  • 63.34
AEIR
  • AEIR
UBERON:0001739laryngeal cartilage
  • UBERON:0000104life cycle
8.97e3
  • 8.97e3
61.14
  • 61.14
AEIR
  • AEIR
UBERON:0016538temporal cortex
  • UBERON:0000104life cycle
9.35e3
  • 9.35e3
59.48
  • 59.48
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
9.53e3
  • 9.53e3
58.69
  • 58.69
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000068embryo stage
9.66e3
  • 9.66e3
58.13
  • 58.13
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
9.81e3
  • 9.81e3
57.49
  • 57.49
AEIR
  • AEIR
UBERON:0007625pigment epithelium of eye
  • UBERON:0000104life cycle
1.09e4
  • 1.09e4
52.89
  • 52.89
AEIR
  • AEIR
UBERON:0010153rumen papilla
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
  • 1.16e4
49.99
  • 49.99
  • 49.89
AEIR
  • AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0018241prime adult stage
1.16e4
  • 1.16e4
49.82
  • 49.82
AEIR
  • AEIR
UBERON:0000378tongue muscle
  • UBERON:0000104life cycle
1.29e4
  • 1.29e4
44.13
  • 44.13
AEIR
  • AEIR
UBERON:0002198neurohypophysis
  • UBERON:0000104life cycle
1.33e4
  • 1.33e4
42.21
  • 42.21
AEIR
  • AEIR
UBERON:0002196adenohypophysis
  • UBERON:0000104life cycle
1.38e4
  • 1.38e4
40.24
  • 40.24
AEIR
  • AEIR
UBERON:0001156ascending colon
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.40e4
  • 1.40e4
  • 1.40e4
39.46
  • 39.46
  • 39.45
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
39.00
  • 39.00
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000104life cycle
1.42e4
  • 1.42e4
38.58
  • 38.58
AEIR
  • AEIR
UBERON:0004703dorsal thalamus
  • UBERON:0018241prime adult stage
1.45e4
  • 1.45e4
37.03
  • 37.03
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.48e4
  • 1.48e4
36.05
  • 36.05
AEIR
  • AEIR
UBERON:0012648ampulla of uterine tube
  • UBERON:0000104life cycle
1.55e4
  • 1.55e4
32.76
  • 32.76
AEIR
  • AEIR
UBERON:0001111intercostal muscle
  • UBERON:0000104life cycle
1.63e4
  • 1.63e4
29.29
  • 29.29
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0018241prime adult stage
1.69e4
  • 1.69e4
26.84
  • 26.84
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.71e4
  • 1.71e4
  • 1.82e4
25.78
  • 25.78
  • 21.13
AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000104life cycle
1.82e4
  • 1.82e4
21.17
  • 21.17
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
2.00e4
  • 2.00e4
  • 2.04e4
13.53
  • 13.53
  • 11.51
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Amniota15 species16 genesCompare expression
Tetrapoda16 species18 genesCompare expression

Orthology information comes from OMA : ENSBTAG00000013642.

Paralogs (same species)

Cross-references

EnsemblENSBTAG00000013642 (SLC22A6)
HGNCHGNC:10970 (SLC22A6)
EMBLDAAA02063488
Uniprot/SPTREMBLF1MIJ1, F1MIJ1_BOVIN

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