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B. taurus Gene: SLC22A8 - ENSBTAG00000013644 - Bos taurus (cattle)

General information

Ensembl IDENSBTAG00000013644
NameSLC22A8
Descriptionsolute carrier family 22 member 8 [Source:RefSeq peptide;Acc:NP_001193175]
OrganismBos taurus (cattle)
Synonym(s)oat3
Orthologs(s)14 orthologs
Paralog(s)34 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
167
  • 167
99.28
  • 99.28
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
245
  • 245
98.94
  • 98.94
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
7.54e3
  • 7.54e3
67.34
  • 67.34
AEIR
  • AEIR
UBERON:0007625pigment epithelium of eye
  • UBERON:0000104life cycle
7.57e3
  • 7.57e3
67.21
  • 67.21
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0000104life cycle
1.05e4
  • 1.05e4
54.62
  • 54.62
AEIR
  • AEIR
UBERON:0003309floor plate of diencephalon
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
53.43
  • 53.43
AEIR
  • AEIR
UBERON:0001739laryngeal cartilage
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
48.80
  • 48.80
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
1.21e4
  • 1.21e4
47.44
  • 47.44
AEIR
  • AEIR
UBERON:0016538temporal cortex
  • UBERON:0000104life cycle
1.23e4
  • 1.23e4
46.52
  • 46.52
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.28e4
  • 1.28e4
  • 1.36e4
44.73
  • 44.73
  • 41.11
AEIR
  • AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0018241prime adult stage
1.35e4
  • 1.35e4
41.35
  • 41.35
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.39e4
  • 1.39e4
39.75
  • 39.75
AEIR
  • AEIR
UBERON:0007367surface of tongue
  • UBERON:0000104life cycle
1.40e4
  • 1.40e4
39.49
  • 39.49
AEIR
  • AEIR
CL:0000711cumulus cell
  • UBERON:0000104life cycle
1.40e4
  • 1.40e4
39.46
  • 39.46
AEIR
  • AEIR
UBERON:0002198neurohypophysis
  • UBERON:0000104life cycle
1.43e4
  • 1.43e4
37.87
  • 37.87
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.47e4
  • 1.47e4
36.41
  • 36.41
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.56e4
  • 1.56e4
32.28
  • 32.28
AEIR
  • AEIR
UBERON:0012648ampulla of uterine tube
  • UBERON:0000104life cycle
1.64e4
  • 1.64e4
28.92
  • 28.92
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0018241prime adult stage
1.70e4
  • 1.70e4
26.36
  • 26.36
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000104life cycle
1.70e4
  • 1.70e4
26.25
  • 26.25
AEIR
  • AEIR
UBERON:0001111intercostal muscle
  • UBERON:0000104life cycle
1.71e4
  • 1.71e4
26.09
  • 26.09
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.75e4
  • 1.75e4
24.21
  • 24.21
AEIR
  • AEIR
UBERON:0001913milk
  • UBERON:0000113post-juvenile adult stage
1.90e4
  • 1.90e4
17.52
  • 17.52
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression

Orthology information comes from OMA : ENSBTAG00000013644.

Paralogs (same species)

Cross-references

EnsemblENSBTAG00000013644 (SLC22A8)
EMBLDAAA02063488
Uniprot/SPTREMBLF1MII8, F1MII8_BOVIN

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