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B. taurus Gene: CDH7 - ENSBTAG00000014488 - Bos taurus (cattle)

General information

Ensembl IDENSBTAG00000014488
NameCDH7
Descriptioncadherin 7, type 2 [Source:HGNC Symbol;Acc:HGNC:1766]
OrganismBos taurus (cattle)
Orthologs(s)18 orthologs
Paralog(s)11 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.66e3
  • 3.66e3
  • 1.21e4
84.15
  • 84.15
  • 47.54
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
6.45e3
  • 6.45e3
72.03
  • 72.03
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
6.54e3
  • 6.54e3
71.65
  • 71.65
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0018241prime adult stage
7.11e3
  • 7.11e3
69.19
  • 69.19
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
8.15e3
  • 8.15e3
  • 1.62e4
64.66
  • 64.66
  • 29.75
AEIR
  • AEIR
  • AEIR
UBERON:0007625pigment epithelium of eye
  • UBERON:0000104life cycle
8.64e3
  • 8.64e3
62.58
  • 62.58
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
8.91e3
  • 8.91e3
61.37
  • 61.37
AEIR
  • AEIR
UBERON:0003309floor plate of diencephalon
  • UBERON:0018241prime adult stage
9.48e3
  • 9.48e3
58.93
  • 58.93
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0000104life cycle
1.12e4
  • 1.12e4
51.29
  • 51.29
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000068embryo stage
1.24e4
  • 1.24e4
46.24
  • 46.24
AEIR
  • AEIR
UBERON:0016538temporal cortex
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
45.48
  • 45.48
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
  • 1.50e4
45.31
  • 45.31
  • 34.84
AEIR
  • AEIR
  • AEIR
UBERON:0002196adenohypophysis
  • UBERON:0000104life cycle
1.27e4
  • 1.27e4
44.83
  • 44.83
AEIR
  • AEIR
UBERON:0001296myometrium
  • UBERON:0000104life cycle
1.30e4
  • 1.30e4
43.50
  • 43.50
AEIR
  • AEIR
UBERON:0012648ampulla of uterine tube
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
42.88
  • 42.88
AEIR
  • AEIR
UBERON:0002081cardiac atrium
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.34e4
  • 1.34e4
  • 1.34e4
41.77
  • 41.77
  • 41.74
AEIR
  • AEIR
  • AEIR
UBERON:0001000vas deferens
  • UBERON:0018241prime adult stage
1.37e4
  • 1.37e4
40.82
  • 40.82
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.40e4
  • 1.40e4
39.49
  • 39.49
AEIR
  • AEIR
UBERON:0002198neurohypophysis
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
39.06
  • 39.06
AEIR
  • AEIR
UBERON:0000002uterine cervix
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.45e4
  • 1.45e4
  • 1.45e4
37.21
  • 37.21
  • 37.18
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.47e4
  • 1.47e4
  • 1.62e4
36.26
  • 36.26
  • 29.67
AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.48e4
  • 1.48e4
35.95
  • 35.95
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.49e4
  • 1.49e4
35.59
  • 35.59
AEIR
  • AEIR
UBERON:0001375semitendinosus
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.51e4
  • 1.51e4
  • 1.65e4
34.37
  • 34.37
  • 28.52
AEIR
  • AEIR
  • AEIR
UBERON:0002110gall bladder
  • UBERON:0000104life cycle
1.53e4
  • 1.53e4
33.70
  • 33.70
AEIR
  • AEIR
UBERON:0004703dorsal thalamus
  • UBERON:0018241prime adult stage
1.54e4
  • 1.54e4
33.11
  • 33.11
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.54e4
  • 1.54e4
  • 1.63e4
33.08
  • 33.08
  • 29.53
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.55e4
  • 1.55e4
32.84
  • 32.84
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000104life cycle
1.63e4
  • 1.63e4
29.39
  • 29.39
AEIR
  • AEIR
UBERON:0001111intercostal muscle
  • UBERON:0000104life cycle
1.67e4
  • 1.67e4
27.65
  • 27.65
AEIR
  • AEIR
CL:0000711cumulus cell
  • UBERON:0000104life cycle
1.67e4
  • 1.67e4
27.54
  • 27.54
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
1.71e4
  • 1.71e4
25.68
  • 25.68
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.73e4
  • 1.73e4
  • 1.93e4
25.00
  • 25.00
  • 16.39
AEIR
  • AEIR
  • AEIR
UBERON:0005386olfactory segment of nasal mucosa
  • UBERON:0000104life cycle
1.81e4
  • 1.81e4
21.67
  • 21.67
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSBTAG00000014488.

Paralogs (same species)

Cross-references

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