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B. taurus Gene: GPD1 - ENSBTAG00000016296 - Bos taurus (cattle)

General information

Ensembl IDENSBTAG00000016296
NameGPD1
Descriptionglycerol-3-phosphate dehydrogenase 1 [Source:HGNC Symbol;Acc:HGNC:4455]
OrganismBos taurus (cattle)
Synonym(s)q2hje6
Orthologs(s)25 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001477infraspinatus muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
85.0
  • 85.0
  • 87.0
99.64
  • 99.64
  • 99.63
AEIR
  • AEIR
  • AEIR
UBERON:0001374biceps femoris
  • UBERON:0000104life cycle
89.0
  • 89.0
99.62
  • 99.62
AEIR
  • AEIR
UBERON:0001375semitendinosus
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
92.0
  • 92.0
  • 250
  • 3.84e3
99.61
  • 99.61
  • 98.92
  • 83.36
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001886choroid plexus
  • UBERON:0018241prime adult stage
92.0
  • 92.0
99.61
  • 99.61
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
107
  • 107
  • 108
99.54
  • 99.54
  • 99.54
AEIR
  • AEIR
  • AEIR
UBERON:0002512corpus luteum
  • UBERON:0000104life cycle
119
  • 119
99.49
  • 99.49
AEIR
  • AEIR
UBERON:0001381semimembranosus muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
123
  • 123
  • 365
99.47
  • 99.47
  • 98.42
AEIR
  • AEIR
  • AEIR
UBERON:0001378rectus femoris
  • UBERON:0000104life cycle
141
  • 141
99.39
  • 99.39
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
145
  • 145
  • 4.85e3
99.38
  • 99.38
  • 79.00
AEIR
  • AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
146
  • 146
  • 219
99.37
  • 99.37
  • 99.06
AEIR
  • AEIR
  • AEIR
UBERON:0002383supraspinatus muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
147
  • 147
  • 148
99.37
  • 99.37
  • 99.36
AEIR
  • AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
161
  • 161
  • 213
  • 430
  • 597
99.31
  • 99.31
  • 99.08
  • 98.14
  • 97.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000104life cycle
173
  • 173
99.25
  • 99.25
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
265
  • 265
98.86
  • 98.86
AEIR
  • AEIR
UBERON:0001739laryngeal cartilage
  • UBERON:0000104life cycle
285
  • 285
98.77
  • 98.77
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
300
  • 300
98.70
  • 98.70
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
396
  • 396
98.29
  • 98.29
AEIR
  • AEIR
UBERON:0004180mammary gland fat
  • UBERON:0018241prime adult stage
408
  • 408
98.24
  • 98.24
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0000104life cycle
427
  • 427
98.15
  • 98.15
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
469
  • 469
97.97
  • 97.97
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
474
  • 474
  • 539
  • 661
97.95
  • 97.95
  • 97.67
  • 97.14
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
581
  • 581
97.49
  • 97.49
AEIR
  • AEIR
UBERON:0000378tongue muscle
  • UBERON:0000104life cycle
626
  • 626
97.29
  • 97.29
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000104life cycle
715
  • 715
96.91
  • 96.91
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0000104life cycle
881
  • 881
96.19
  • 96.19
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
920
  • 920
  • 2.34e3
96.02
  • 96.02
  • 89.88
AEIR
  • AEIR
  • AEIR
UBERON:0004703dorsal thalamus
  • UBERON:0018241prime adult stage
1.02e3
  • 1.02e3
95.60
  • 95.60
AEIR
  • AEIR
UBERON:0001826nasal cavity mucosa
  • UBERON:0000104life cycle
1.15e3
  • 1.15e3
95.02
  • 95.02
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.25e3
  • 1.25e3
  • 3.77e3
94.60
  • 94.60
  • 83.66
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.25e3
  • 1.25e3
  • 3.82e3
94.57
  • 94.57
  • 83.43
AEIR
  • AEIR
  • AEIR
UBERON:0003309floor plate of diencephalon
  • UBERON:0018241prime adult stage
1.38e3
  • 1.38e3
94.03
  • 94.03
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0000104life cycle
1.44e3
  • 1.44e3
93.76
  • 93.76
AEIR
  • AEIR
UBERON:0016538temporal cortex
  • UBERON:0000104life cycle
1.69e3
  • 1.69e3
92.70
  • 92.70
AEIR
  • AEIR
UBERON:0001111intercostal muscle
  • UBERON:0000104life cycle
1.81e3
  • 1.81e3
92.18
  • 92.18
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0018241prime adult stage
2.43e3
  • 2.43e3
89.47
  • 89.47
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0000104life cycle
2.48e3
  • 2.48e3
89.26
  • 89.26
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000068embryo stage
2.79e3
  • 2.79e3
87.90
  • 87.90
AEIR
  • AEIR
UBERON:0002081cardiac atrium
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.85e3
  • 2.85e3
  • 2.89e3
87.66
  • 87.66
  • 87.49
AEIR
  • AEIR
  • AEIR
UBERON:0003984uterine tube infundibulum
  • UBERON:0000104life cycle
3.02e3
  • 3.02e3
86.89
  • 86.89
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
3.08e3
  • 3.08e3
86.67
  • 86.67
AEIR
  • AEIR
UBERON:0004358caput epididymis
  • UBERON:0018241prime adult stage
3.13e3
  • 3.13e3
86.42
  • 86.42
AEIR
  • AEIR
UBERON:0016632isthmus of fallopian tube
  • UBERON:0000104life cycle
3.14e3
  • 3.14e3
86.39
  • 86.39
AEIR
  • AEIR
UBERON:0001913milk
  • UBERON:0000113post-juvenile adult stage
3.21e3
  • 3.21e3
86.07
  • 86.07
AEIR
  • AEIR
UBERON:0002198neurohypophysis
  • UBERON:0000104life cycle
3.30e3
  • 3.30e3
85.71
  • 85.71
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
3.51e3
  • 3.51e3
84.78
  • 84.78
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
3.67e3
  • 3.67e3
  • 7.51e3
84.11
  • 84.11
  • 67.44
AEIR
  • AEIR
  • AEIR
UBERON:0001296myometrium
  • UBERON:0000104life cycle
3.69e3
  • 3.69e3
84.01
  • 84.01
AEIR
  • AEIR
UBERON:0007367surface of tongue
  • UBERON:0000104life cycle
3.77e3
  • 3.77e3
83.66
  • 83.66
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0018241prime adult stage
4.17e3
  • 4.17e3
81.92
  • 81.92
AEIR
  • AEIR
UBERON:0000057urethra
  • UBERON:0000104life cycle
4.43e3
  • 4.43e3
80.79
  • 80.79
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
4.52e3
  • 4.52e3
  • 7.95e3
80.43
  • 80.43
  • 65.53
AEIR
  • AEIR
  • AEIR
UBERON:0003126trachea
  • UBERON:0000104life cycle
4.78e3
  • 4.78e3
79.31
  • 79.31
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
4.90e3
  • 4.90e3
  • 5.31e3
78.75
  • 78.75
  • 76.99
AEIR
  • AEIR
  • AEIR
UBERON:0002247uterine horn
  • UBERON:0018241prime adult stage
4.91e3
  • 4.91e3
78.74
  • 78.74
AEIR
  • AEIR
UBERON:0007625pigment epithelium of eye
  • UBERON:0000104life cycle
5.01e3
  • 5.01e3
78.29
  • 78.29
AEIR
  • AEIR
UBERON:0012648ampulla of uterine tube
  • UBERON:0000104life cycle
5.30e3
  • 5.30e3
77.04
  • 77.04
AEIR
  • AEIR
UBERON:0002196adenohypophysis
  • UBERON:0000104life cycle
5.41e3
  • 5.41e3
76.55
  • 76.55
AEIR
  • AEIR
UBERON:0000056ureter
  • UBERON:0000104life cycle
5.71e3
  • 5.71e3
75.28
  • 75.28
AEIR
  • AEIR
UBERON:0000002uterine cervix
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
5.77e3
  • 5.77e3
  • 5.77e3
75.00
  • 75.00
  • 74.98
AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0000104life cycle
5.83e3
  • 5.83e3
74.75
  • 74.75
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
5.87e3
  • 5.87e3
74.58
  • 74.58
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0000104life cycle
5.97e3
  • 5.97e3
74.11
  • 74.11
AEIR
  • AEIR
UBERON:0001158descending colon
  • UBERON:0000104life cycle
6.13e3
  • 6.13e3
73.44
  • 73.44
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
6.16e3
  • 6.16e3
  • 6.46e3
73.32
  • 73.32
  • 72.00
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
6.17e3
  • 6.17e3
73.27
  • 73.27
AEIR
  • AEIR
UBERON:0001000vas deferens
  • UBERON:0018241prime adult stage
6.26e3
  • 6.26e3
72.88
  • 72.88
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
6.32e3
  • 6.32e3
72.61
  • 72.61
AEIR
  • AEIR
UBERON:0002367prostate gland
  • UBERON:0018241prime adult stage
6.44e3
  • 6.44e3
72.07
  • 72.07
AEIR
  • AEIR
UBERON:0007361ruminant reticulum
  • UBERON:0018241prime adult stage
6.48e3
  • 6.48e3
71.93
  • 71.93
AEIR
  • AEIR
UBERON:0007358abomasum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
6.55e3
  • 6.55e3
  • 6.58e3
71.61
  • 71.61
  • 71.48
AEIR
  • AEIR
  • AEIR
UBERON:0000051fornix of vagina
  • UBERON:0000104life cycle
6.56e3
  • 6.56e3
71.59
  • 71.59
AEIR
  • AEIR
UBERON:0007362omasum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
6.59e3
  • 6.59e3
  • 6.59e3
71.46
  • 71.46
  • 71.43
AEIR
  • AEIR
  • AEIR
UBERON:0005386olfactory segment of nasal mucosa
  • UBERON:0000104life cycle
6.80e3
  • 6.80e3
70.53
  • 70.53
AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
7.04e3
  • 7.04e3
  • 7.26e3
  • 8.08e3
69.48
  • 69.48
  • 68.54
  • 64.97
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007365rumen
  • UBERON:0000112sexually immature stage
7.11e3
  • 7.11e3
69.19
  • 69.19
AEIR
  • AEIR
UBERON:0001156ascending colon
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
7.23e3
  • 7.23e3
  • 7.25e3
68.67
  • 68.67
  • 68.59
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
7.43e3
  • 7.43e3
67.82
  • 67.82
AEIR
  • AEIR
UBERON:0002110gall bladder
  • UBERON:0000104life cycle
7.75e3
  • 7.75e3
66.42
  • 66.42
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
7.75e3
  • 7.75e3
  • 8.20e3
66.41
  • 66.41
  • 64.45
AEIR
  • AEIR
  • AEIR
CL:0000503theca cell
  • UBERON:0018241prime adult stage
7.79e3
  • 7.79e3
66.25
  • 66.25
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
8.05e3
  • 8.05e3
65.11
  • 65.11
AEIR
  • AEIR
UBERON:0002507abdominal lymph node
  • UBERON:0018241prime adult stage
8.13e3
  • 8.13e3
64.77
  • 64.77
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
8.22e3
  • 8.22e3
64.38
  • 64.38
AEIR
  • AEIR
UBERON:0010153rumen papilla
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
8.57e3
  • 8.57e3
  • 8.60e3
62.85
  • 62.85
  • 62.72
AEIR
  • AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0018241prime adult stage
8.61e3
  • 8.61e3
62.70
  • 62.70
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000104life cycle
8.66e3
  • 8.66e3
62.46
  • 62.46
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0018241prime adult stage
8.91e3
  • 8.91e3
61.38
  • 61.38
AEIR
  • AEIR
UBERON:0015869retropharyngeal lymph node
  • UBERON:0000104life cycle
8.98e3
  • 8.98e3
61.09
  • 61.09
AEIR
  • AEIR
CL:0000775neutrophil
  • UBERON:0018241prime adult stage
9.01e3
  • 9.01e3
60.97
  • 60.97
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
9.69e3
  • 9.69e3
58.03
  • 58.03
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
9.80e3
  • 9.80e3
  • 1.03e4
57.52
  • 57.52
  • 55.58
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.01e4
  • 1.01e4
  • 1.01e4
  • 1.02e4
  • 1.37e4
56.38
  • 56.38
  • 56.13
  • 55.65
  • 40.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001103diaphragm
  • UBERON:0000104life cycle
1.02e4
  • 1.02e4
55.91
  • 55.91
AEIR
  • AEIR
CL:0000711cumulus cell
  • UBERON:0000104life cycle
1.17e4
  • 1.17e4
49.13
  • 49.13
AEIR
  • AEIR
UBERON:0004716conceptus
  • UBERON:0000068embryo stage
1.20e4
  • 1.20e4
48.09
  • 48.09
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression
Bilateria24 species25 genesCompare expression

Orthology information comes from OMA : ENSBTAG00000016296.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSBTAG00000016296.

Cross-references

EnsemblENSBTAG00000016296 (GPD1)
HGNCHGNC:4455 (GPD1)
EMBLBC105513, BT020681
Uniprot/SWISSPROTGPDA_BOVIN, Q5EA88

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