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B. taurus Gene: DEPDC1B - ENSBTAG00000017026 - Bos taurus (cattle)

General information

Ensembl IDENSBTAG00000017026
NameDEPDC1B
DescriptionDEP domain containing 1B [Source:HGNC Symbol;Acc:HGNC:24902]
OrganismBos taurus (cattle)
Synonym(s)brcc3, xtp1
Orthologs(s)20 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004716conceptus
  • UBERON:0000068embryo stage
4.92e3
  • 4.92e3
78.70
  • 78.70
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
7.07e3
  • 7.07e3
69.38
  • 69.38
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
7.38e3
  • 7.38e3
  • 7.42e3
  • 9.56e3
  • 1.37e4
68.03
  • 68.03
  • 67.83
  • 58.58
  • 40.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000711cumulus cell
  • UBERON:0000104life cycle
7.42e3
  • 7.42e3
67.86
  • 67.86
AEIR
  • AEIR
UBERON:0010153rumen papilla
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
8.76e3
  • 8.76e3
  • 8.81e3
62.04
  • 62.04
  • 61.84
AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
8.92e3
  • 8.92e3
61.33
  • 61.33
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0018241prime adult stage
9.11e3
  • 9.11e3
60.50
  • 60.50
AEIR
  • AEIR
UBERON:0015869retropharyngeal lymph node
  • UBERON:0000104life cycle
9.16e3
  • 9.16e3
60.31
  • 60.31
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0018241prime adult stage
9.73e3
  • 9.73e3
57.81
  • 57.81
AEIR
  • AEIR
UBERON:0001103diaphragm
  • UBERON:0000104life cycle
9.91e3
  • 9.91e3
57.07
  • 57.07
AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.00e4
  • 1.00e4
  • 1.08e4
  • 1.21e4
56.66
  • 56.66
  • 53.11
  • 47.45
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007358abomasum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.02e4
  • 1.02e4
  • 1.03e4
55.62
  • 55.62
  • 55.54
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
1.06e4
  • 1.06e4
54.04
  • 54.04
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.09e4
  • 1.09e4
  • 1.21e4
52.69
  • 52.69
  • 47.49
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.12e4
  • 1.12e4
  • 1.94e4
51.43
  • 51.43
  • 16.07
AEIR
  • AEIR
  • AEIR
UBERON:0001913milk
  • UBERON:0000113post-juvenile adult stage
1.12e4
  • 1.12e4
51.42
  • 51.42
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.14e4
  • 1.14e4
  • 1.42e4
50.61
  • 50.61
  • 38.53
AEIR
  • AEIR
  • AEIR
UBERON:0001158descending colon
  • UBERON:0000104life cycle
1.16e4
  • 1.16e4
49.54
  • 49.54
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.17e4
  • 1.17e4
  • 1.26e4
49.17
  • 49.17
  • 45.29
AEIR
  • AEIR
  • AEIR
UBERON:0002081cardiac atrium
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
  • 1.18e4
48.90
  • 48.90
  • 48.80
AEIR
  • AEIR
  • AEIR
CL:0000503theca cell
  • UBERON:0018241prime adult stage
1.19e4
  • 1.19e4
48.42
  • 48.42
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
1.19e4
  • 1.19e4
48.36
  • 48.36
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000104life cycle
1.20e4
  • 1.20e4
48.13
  • 48.13
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.20e4
  • 1.20e4
  • 1.46e4
48.02
  • 48.02
  • 36.74
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.21e4
  • 1.21e4
  • 1.77e4
47.43
  • 47.43
  • 23.40
AEIR
  • AEIR
  • AEIR
UBERON:0002110gall bladder
  • UBERON:0000104life cycle
1.23e4
  • 1.23e4
46.86
  • 46.86
AEIR
  • AEIR
UBERON:0001826nasal cavity mucosa
  • UBERON:0000104life cycle
1.23e4
  • 1.23e4
46.63
  • 46.63
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0000104life cycle
1.25e4
  • 1.25e4
45.69
  • 45.69
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
1.26e4
  • 1.26e4
45.58
  • 45.58
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000104life cycle
1.27e4
  • 1.27e4
45.11
  • 45.11
AEIR
  • AEIR
UBERON:0001000vas deferens
  • UBERON:0018241prime adult stage
1.28e4
  • 1.28e4
44.58
  • 44.58
AEIR
  • AEIR
UBERON:0007362omasum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.29e4
  • 1.29e4
  • 1.30e4
44.25
  • 44.25
  • 43.82
AEIR
  • AEIR
  • AEIR
UBERON:0004703dorsal thalamus
  • UBERON:0018241prime adult stage
1.30e4
  • 1.30e4
43.81
  • 43.81
AEIR
  • AEIR
UBERON:0007361ruminant reticulum
  • UBERON:0018241prime adult stage
1.31e4
  • 1.31e4
43.14
  • 43.14
AEIR
  • AEIR
UBERON:0001156ascending colon
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.35e4
  • 1.35e4
  • 1.35e4
41.68
  • 41.68
  • 41.63
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
1.35e4
  • 1.35e4
41.31
  • 41.31
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000068embryo stage
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.37e4
  • 1.37e4
  • 1.61e4
  • 1.61e4
  • 2.04e4
40.79
  • 40.79
  • 30.40
  • 30.28
  • 11.51
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0034908scapular muscle
  • UBERON:0000104life cycle
1.39e4
  • 1.39e4
39.62
  • 39.62
AEIR
  • AEIR
UBERON:0004358caput epididymis
  • UBERON:0018241prime adult stage
1.39e4
  • 1.39e4
39.59
  • 39.59
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
  • 1.45e4
39.03
  • 39.03
  • 36.98
AEIR
  • AEIR
  • AEIR
UBERON:0007365rumen
  • UBERON:0000112sexually immature stage
1.42e4
  • 1.42e4
38.25
  • 38.25
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0000104life cycle
1.44e4
  • 1.44e4
37.61
  • 37.61
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0018241prime adult stage
1.45e4
  • 1.45e4
37.09
  • 37.09
AEIR
  • AEIR
UBERON:0003309floor plate of diencephalon
  • UBERON:0018241prime adult stage
1.45e4
  • 1.45e4
36.96
  • 36.96
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000068embryo stage
1.46e4
  • 1.46e4
36.69
  • 36.69
AEIR
  • AEIR
UBERON:0001375semitendinosus
  • UBERON:0000104life cycle
1.50e4
  • 1.50e4
34.95
  • 34.95
AEIR
  • AEIR
UBERON:0005386olfactory segment of nasal mucosa
  • UBERON:0000104life cycle
1.52e4
  • 1.52e4
34.06
  • 34.06
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.54e4
  • 1.54e4
  • 1.73e4
33.37
  • 33.37
  • 25.21
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.57e4
  • 1.57e4
31.88
  • 31.88
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.63e4
  • 1.63e4
  • 1.76e4
29.25
  • 29.25
  • 23.66
AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
1.65e4
  • 1.65e4
28.43
  • 28.43
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.66e4
  • 1.66e4
27.88
  • 27.88
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.69e4
  • 1.69e4
  • 1.74e4
26.60
  • 26.60
  • 24.76
AEIR
  • AEIR
  • AEIR
UBERON:0002247uterine horn
  • UBERON:0018241prime adult stage
1.70e4
  • 1.70e4
26.23
  • 26.23
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.73e4
  • 1.73e4
24.98
  • 24.98
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species15 genesCompare expression
Mammalia15 species16 genesCompare expression
Amniota17 species18 genesCompare expression
Tetrapoda18 species19 genesCompare expression
Euteleostomi19 species20 genesCompare expression

Orthology information comes from OMA : ENSBTAG00000017026.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression

Paralogy information comes from OMA : ENSBTAG00000017026.

Cross-references

EnsemblENSBTAG00000017026 (DEPDC1B)
HGNCHGNC:24902 (DEPDC1B)
EMBLDAAA02050259, DAAA02050260
Uniprot/SPTREMBLE1BLB3, E1BLB3_BOVIN

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