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B. taurus Gene: LY6E - ENSBTAG00000017040 - Bos taurus (cattle)

General information

Ensembl IDENSBTAG00000017040
NameLY6E
Descriptionlymphocyte antigen 6 complex, locus E [Source:HGNC Symbol;Acc:HGNC:6727]
OrganismBos taurus (cattle)
Synonym(s)f1mfg5, rig-e, sca-2, tsa-1
Orthologs(s)15 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001826nasal cavity mucosa
  • UBERON:0000104life cycle
152
  • 152
99.35
  • 99.35
AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • UBERON:0000104life cycle
219
  • 219
99.05
  • 99.05
AEIR
  • AEIR
UBERON:0000002uterine cervix
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
226
  • 226
  • 229
99.02
  • 99.02
  • 99.01
AEIR
  • AEIR
  • AEIR
UBERON:0000051fornix of vagina
  • UBERON:0000104life cycle
226
  • 226
99.02
  • 99.02
AEIR
  • AEIR
UBERON:0016632isthmus of fallopian tube
  • UBERON:0000104life cycle
229
  • 229
99.01
  • 99.01
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
234
  • 234
  • 856
98.99
  • 98.99
  • 96.29
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
247
  • 247
  • 4.76e3
98.93
  • 98.93
  • 79.37
AEIR
  • AEIR
  • AEIR
UBERON:0016538temporal cortex
  • UBERON:0000104life cycle
256
  • 256
98.89
  • 98.89
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0000104life cycle
258
  • 258
98.89
  • 98.89
AEIR
  • AEIR
UBERON:0012648ampulla of uterine tube
  • UBERON:0000104life cycle
260
  • 260
98.88
  • 98.88
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000068embryo stage
292
  • 292
98.74
  • 98.74
AEIR
  • AEIR
UBERON:0005386olfactory segment of nasal mucosa
  • UBERON:0000104life cycle
293
  • 293
98.73
  • 98.73
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
293
  • 293
98.73
  • 98.73
AEIR
  • AEIR
UBERON:0002367prostate gland
  • UBERON:0018241prime adult stage
296
  • 296
98.72
  • 98.72
AEIR
  • AEIR
UBERON:0002198neurohypophysis
  • UBERON:0000104life cycle
321
  • 321
98.61
  • 98.61
AEIR
  • AEIR
UBERON:0001000vas deferens
  • UBERON:0018241prime adult stage
331
  • 331
98.57
  • 98.57
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
351
  • 351
98.48
  • 98.48
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
387
  • 387
  • 569
98.33
  • 98.33
  • 97.54
AEIR
  • AEIR
  • AEIR
UBERON:0002196adenohypophysis
  • UBERON:0000104life cycle
396
  • 396
98.29
  • 98.29
AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
398
  • 398
  • 669
  • 1.17e3
98.28
  • 98.28
  • 97.10
  • 94.91
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002247uterine horn
  • UBERON:0018241prime adult stage
433
  • 433
98.13
  • 98.13
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0000104life cycle
443
  • 443
98.08
  • 98.08
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
515
  • 515
  • 1.80e3
97.77
  • 97.77
  • 92.21
AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0000104life cycle
516
  • 516
97.77
  • 97.77
AEIR
  • AEIR
UBERON:0003309floor plate of diencephalon
  • UBERON:0018241prime adult stage
582
  • 582
97.48
  • 97.48
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
589
  • 589
97.45
  • 97.45
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
607
  • 607
97.37
  • 97.37
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0018241prime adult stage
623
  • 623
97.30
  • 97.30
AEIR
  • AEIR
UBERON:0007625pigment epithelium of eye
  • UBERON:0000104life cycle
690
  • 690
97.01
  • 97.01
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
702
  • 702
  • 7.84e3
  • 1.21e4
96.96
  • 96.96
  • 66.02
  • 47.69
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
712
  • 712
  • 1.14e4
96.92
  • 96.92
  • 50.73
AEIR
  • AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
734
  • 734
96.82
  • 96.82
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
745
  • 745
96.78
  • 96.78
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0018241prime adult stage
753
  • 753
96.74
  • 96.74
AEIR
  • AEIR
UBERON:0015869retropharyngeal lymph node
  • UBERON:0000104life cycle
759
  • 759
96.71
  • 96.71
AEIR
  • AEIR
UBERON:0000057urethra
  • UBERON:0000104life cycle
947
  • 947
95.90
  • 95.90
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.09e3
  • 1.09e3
95.30
  • 95.30
AEIR
  • AEIR
UBERON:0004703dorsal thalamus
  • UBERON:0018241prime adult stage
1.15e3
  • 1.15e3
95.02
  • 95.02
AEIR
  • AEIR
UBERON:0001739laryngeal cartilage
  • UBERON:0000104life cycle
1.23e3
  • 1.23e3
94.66
  • 94.66
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.28e3
  • 1.28e3
  • 9.57e3
94.48
  • 94.48
  • 58.53
AEIR
  • AEIR
  • AEIR
UBERON:0004358caput epididymis
  • UBERON:0018241prime adult stage
1.37e3
  • 1.37e3
94.06
  • 94.06
AEIR
  • AEIR
UBERON:0007367surface of tongue
  • UBERON:0000104life cycle
1.42e3
  • 1.42e3
93.86
  • 93.86
AEIR
  • AEIR
UBERON:0001158descending colon
  • UBERON:0000104life cycle
1.51e3
  • 1.51e3
93.46
  • 93.46
AEIR
  • AEIR
UBERON:0002512corpus luteum
  • UBERON:0000104life cycle
1.77e3
  • 1.77e3
92.34
  • 92.34
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.79e3
  • 1.79e3
  • 2.38e3
92.25
  • 92.25
  • 89.67
AEIR
  • AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0000104life cycle
1.80e3
  • 1.80e3
92.18
  • 92.18
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
1.92e3
  • 1.92e3
91.70
  • 91.70
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.97e3
  • 1.97e3
  • 5.36e3
91.46
  • 91.46
  • 76.75
AEIR
  • AEIR
  • AEIR
UBERON:0003984uterine tube infundibulum
  • UBERON:0000104life cycle
2.00e3
  • 2.00e3
91.34
  • 91.34
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
2.13e3
  • 2.13e3
90.79
  • 90.79
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.20e3
  • 2.20e3
  • 2.91e3
90.48
  • 90.48
  • 87.38
AEIR
  • AEIR
  • AEIR
UBERON:0007358abomasum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.25e3
  • 2.25e3
  • 2.28e3
90.25
  • 90.25
  • 90.12
AEIR
  • AEIR
  • AEIR
UBERON:0001886choroid plexus
  • UBERON:0018241prime adult stage
2.48e3
  • 2.48e3
89.27
  • 89.27
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000104life cycle
2.55e3
  • 2.55e3
88.96
  • 88.96
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.61e3
  • 2.61e3
  • 3.30e3
88.67
  • 88.67
  • 85.71
AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.71e3
  • 2.71e3
  • 2.73e3
88.27
  • 88.27
  • 88.15
AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
2.76e3
  • 2.76e3
88.06
  • 88.06
AEIR
  • AEIR
UBERON:0001156ascending colon
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.77e3
  • 2.77e3
  • 2.80e3
87.98
  • 87.98
  • 87.86
AEIR
  • AEIR
  • AEIR
UBERON:0001296myometrium
  • UBERON:0000104life cycle
2.82e3
  • 2.82e3
87.78
  • 87.78
AEIR
  • AEIR
UBERON:0001375semitendinosus
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
2.84e3
  • 2.84e3
  • 4.04e3
  • 5.91e3
87.70
  • 87.70
  • 82.50
  • 74.37
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001374biceps femoris
  • UBERON:0000104life cycle
3.02e3
  • 3.02e3
86.94
  • 86.94
AEIR
  • AEIR
UBERON:0000378tongue muscle
  • UBERON:0000104life cycle
3.03e3
  • 3.03e3
86.89
  • 86.89
AEIR
  • AEIR
UBERON:0001477infraspinatus muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
3.12e3
  • 3.12e3
  • 3.16e3
86.49
  • 86.49
  • 86.31
AEIR
  • AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000104life cycle
3.31e3
  • 3.31e3
85.67
  • 85.67
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000112sexually immature stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
3.32e3
  • 3.32e3
  • 4.26e3
  • 7.18e3
  • 8.76e3
85.60
  • 85.60
  • 81.55
  • 68.90
  • 62.05
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002383supraspinatus muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.36e3
  • 3.36e3
  • 3.38e3
85.43
  • 85.43
  • 85.36
AEIR
  • AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0000104life cycle
3.38e3
  • 3.38e3
85.37
  • 85.37
AEIR
  • AEIR
UBERON:0003126trachea
  • UBERON:0000104life cycle
3.42e3
  • 3.42e3
85.18
  • 85.18
AEIR
  • AEIR
UBERON:0001378rectus femoris
  • UBERON:0000104life cycle
3.47e3
  • 3.47e3
84.98
  • 84.98
AEIR
  • AEIR
UBERON:0007362omasum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
3.67e3
  • 3.67e3
  • 3.70e3
84.12
  • 84.12
  • 83.98
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
3.76e3
  • 3.76e3
  • 8.53e3
83.72
  • 83.72
  • 63.03
AEIR
  • AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0018241prime adult stage
3.78e3
  • 3.78e3
83.61
  • 83.61
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.91e3
  • 3.91e3
  • 9.96e3
83.04
  • 83.04
  • 56.83
AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000104life cycle
3.98e3
  • 3.98e3
82.76
  • 82.76
AEIR
  • AEIR
UBERON:0000056ureter
  • UBERON:0000104life cycle
3.99e3
  • 3.99e3
82.72
  • 82.72
AEIR
  • AEIR
UBERON:0004180mammary gland fat
  • UBERON:0018241prime adult stage
4.37e3
  • 4.37e3
81.08
  • 81.08
AEIR
  • AEIR
UBERON:0002081cardiac atrium
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
4.49e3
  • 4.49e3
  • 4.58e3
80.56
  • 80.56
  • 80.16
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
4.49e3
  • 4.49e3
  • 6.26e3
  • 7.03e3
80.53
  • 80.53
  • 72.87
  • 69.52
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
4.59e3
  • 4.59e3
80.10
  • 80.10
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
4.60e3
  • 4.60e3
80.07
  • 80.07
AEIR
  • AEIR
UBERON:0001381semimembranosus muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
4.80e3
  • 4.80e3
  • 5.28e3
79.22
  • 79.22
  • 77.13
AEIR
  • AEIR
  • AEIR
UBERON:0001913milk
  • UBERON:0000113post-juvenile adult stage
5.06e3
  • 5.06e3
78.08
  • 78.08
AEIR
  • AEIR
UBERON:0001111intercostal muscle
  • UBERON:0000104life cycle
5.35e3
  • 5.35e3
76.83
  • 76.83
AEIR
  • AEIR
CL:0000503theca cell
  • UBERON:0018241prime adult stage
5.83e3
  • 5.83e3
74.73
  • 74.73
AEIR
  • AEIR
UBERON:0004716conceptus
  • UBERON:0000068embryo stage
6.02e3
  • 6.02e3
73.92
  • 73.92
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0000104life cycle
6.50e3
  • 6.50e3
71.84
  • 71.84
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
7.03e3
  • 7.03e3
69.53
  • 69.53
AEIR
  • AEIR
CL:0000775neutrophil
  • UBERON:0018241prime adult stage
7.16e3
  • 7.16e3
68.98
  • 68.98
AEIR
  • AEIR
UBERON:0010153rumen papilla
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
7.76e3
  • 7.76e3
  • 7.82e3
66.36
  • 66.36
  • 66.12
AEIR
  • AEIR
  • AEIR
UBERON:0007361ruminant reticulum
  • UBERON:0018241prime adult stage
8.23e3
  • 8.23e3
64.34
  • 64.34
AEIR
  • AEIR
UBERON:0002110gall bladder
  • UBERON:0000104life cycle
8.59e3
  • 8.59e3
62.79
  • 62.79
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
9.07e3
  • 9.07e3
  • 1.00e4
  • 1.04e4
  • 1.37e4
60.68
  • 60.68
  • 56.46
  • 55.05
  • 40.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001103diaphragm
  • UBERON:0000104life cycle
1.01e4
  • 1.01e4
56.16
  • 56.16
AEIR
  • AEIR
UBERON:0007365rumen
  • UBERON:0000112sexually immature stage
1.07e4
  • 1.07e4
53.41
  • 53.41
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.09e4
  • 1.09e4
52.84
  • 52.84
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.13e4
  • 1.13e4
50.92
  • 50.92
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0018241prime adult stage
1.20e4
  • 1.20e4
48.10
  • 48.10
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria11 species12 genesCompare expression
Amniota13 species14 genesCompare expression
Tetrapoda14 species15 genesCompare expression

Orthology information comes from OMA : ENSBTAG00000017040.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Tetrapoda1 geneCompare expression

Paralogy information comes from OMA : ENSBTAG00000017040.

Cross-references

EnsemblENSBTAG00000017040 (LY6E)
HGNCHGNC:6727 (LY6E)
EMBLBC114823, DAAA02037473
Uniprot/SPTREMBLQ1RMM2, Q1RMM2_BOVIN

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