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B. taurus Gene: CHRNA4 - ENSBTAG00000017198 - Bos taurus (cattle)

General information

Ensembl IDENSBTAG00000017198
NameCHRNA4
Descriptioncholinergic receptor, nicotinic alpha 4 [Source:HGNC Symbol;Acc:HGNC:1958]
OrganismBos taurus (cattle)
Synonym(s)bfnc, ebn, ebn1
Orthologs(s)12 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
6.99e3
  • 6.99e3
69.71
  • 69.71
AEIR
  • AEIR
UBERON:0003309floor plate of diencephalon
  • UBERON:0018241prime adult stage
8.07e3
  • 8.07e3
65.02
  • 65.02
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000068embryo stage
8.07e3
  • 8.07e3
65.01
  • 65.01
AEIR
  • AEIR
UBERON:0016538temporal cortex
  • UBERON:0000104life cycle
8.72e3
  • 8.72e3
62.20
  • 62.20
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
8.85e3
  • 8.85e3
  • 1.52e4
61.63
  • 61.63
  • 34.10
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
8.94e3
  • 8.94e3
61.27
  • 61.27
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
9.20e3
  • 9.20e3
60.15
  • 60.15
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0000104life cycle
1.00e4
  • 1.00e4
56.56
  • 56.56
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0018241prime adult stage
1.08e4
  • 1.08e4
52.98
  • 52.98
AEIR
  • AEIR
UBERON:0001374biceps femoris
  • UBERON:0000104life cycle
1.21e4
  • 1.21e4
47.52
  • 47.52
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.37e4
  • 1.37e4
  • 1.38e4
  • 1.44e4
40.61
  • 40.61
  • 40.07
  • 37.80
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002198neurohypophysis
  • UBERON:0000104life cycle
1.42e4
  • 1.42e4
38.40
  • 38.40
AEIR
  • AEIR
UBERON:0004703dorsal thalamus
  • UBERON:0018241prime adult stage
1.44e4
  • 1.44e4
37.46
  • 37.46
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000104life cycle
1.45e4
  • 1.45e4
37.04
  • 37.04
AEIR
  • AEIR
UBERON:0012648ampulla of uterine tube
  • UBERON:0000104life cycle
1.77e4
  • 1.77e4
23.44
  • 23.44
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSBTAG00000017198 (CHRNA4)
HGNCHGNC:1958 (CHRNA4)
EMBLDAAA02036229
Uniprot/SPTREMBLE1BHK0, E1BHK0_BOVIN

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