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B. taurus Gene: FRMD5 - ENSBTAG00000017216 - Bos taurus (cattle)

General information

Ensembl IDENSBTAG00000017216
NameFRMD5
DescriptionFERM domain containing 5 [Source:HGNC Symbol;Acc:HGNC:28214]
OrganismBos taurus (cattle)
Synonym(s)mgc14161
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • UBERON:0000104life cycle
2.85e3
  • 2.85e3
87.66
  • 87.66
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
5.13e3
  • 5.13e3
  • 1.15e4
77.76
  • 77.76
  • 50.33
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
5.14e3
  • 5.14e3
77.73
  • 77.73
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
5.37e3
  • 5.37e3
  • 7.63e3
76.74
  • 76.74
  • 66.92
AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
5.61e3
  • 5.61e3
75.71
  • 75.71
AEIR
  • AEIR
UBERON:0002081cardiac atrium
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
5.70e3
  • 5.70e3
  • 5.71e3
75.32
  • 75.32
  • 75.25
AEIR
  • AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0018241prime adult stage
6.80e3
  • 6.80e3
70.52
  • 70.52
AEIR
  • AEIR
UBERON:0016538temporal cortex
  • UBERON:0000104life cycle
6.84e3
  • 6.84e3
70.37
  • 70.37
AEIR
  • AEIR
UBERON:0003309floor plate of diencephalon
  • UBERON:0018241prime adult stage
7.10e3
  • 7.10e3
69.25
  • 69.25
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0000104life cycle
8.60e3
  • 8.60e3
62.72
  • 62.72
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000068embryo stage
8.63e3
  • 8.63e3
62.60
  • 62.60
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0000104life cycle
1.02e4
  • 1.02e4
55.73
  • 55.73
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
55.53
  • 55.53
AEIR
  • AEIR
UBERON:0002196adenohypophysis
  • UBERON:0000104life cycle
1.12e4
  • 1.12e4
51.49
  • 51.49
AEIR
  • AEIR
UBERON:0004703dorsal thalamus
  • UBERON:0018241prime adult stage
1.12e4
  • 1.12e4
51.41
  • 51.41
AEIR
  • AEIR
UBERON:0002367prostate gland
  • UBERON:0018241prime adult stage
1.13e4
  • 1.13e4
51.19
  • 51.19
AEIR
  • AEIR
UBERON:0002198neurohypophysis
  • UBERON:0000104life cycle
1.17e4
  • 1.17e4
49.27
  • 49.27
AEIR
  • AEIR
UBERON:0002512corpus luteum
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
48.88
  • 48.88
AEIR
  • AEIR
UBERON:0007625pigment epithelium of eye
  • UBERON:0000104life cycle
1.19e4
  • 1.19e4
48.45
  • 48.45
AEIR
  • AEIR
UBERON:0001739laryngeal cartilage
  • UBERON:0000104life cycle
1.21e4
  • 1.21e4
47.44
  • 47.44
AEIR
  • AEIR
UBERON:0001000vas deferens
  • UBERON:0018241prime adult stage
1.23e4
  • 1.23e4
46.56
  • 46.56
AEIR
  • AEIR
CL:0000711cumulus cell
  • UBERON:0000104life cycle
1.25e4
  • 1.25e4
45.86
  • 45.86
AEIR
  • AEIR
UBERON:0012648ampulla of uterine tube
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
45.37
  • 45.37
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
1.31e4
  • 1.31e4
43.28
  • 43.28
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0000104life cycle
1.33e4
  • 1.33e4
42.41
  • 42.41
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.36e4
  • 1.36e4
41.07
  • 41.07
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.37e4
  • 1.37e4
  • 1.54e4
  • 1.60e4
40.61
  • 40.61
  • 33.21
  • 30.56
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001296myometrium
  • UBERON:0000104life cycle
1.39e4
  • 1.39e4
39.75
  • 39.75
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0018241prime adult stage
1.41e4
  • 1.41e4
39.06
  • 39.06
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0018241prime adult stage
1.41e4
  • 1.41e4
38.84
  • 38.84
AEIR
  • AEIR
UBERON:0002000gluteal muscle
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
38.74
  • 38.74
AEIR
  • AEIR
UBERON:0000056ureter
  • UBERON:0000104life cycle
1.45e4
  • 1.45e4
37.09
  • 37.09
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.46e4
  • 1.46e4
36.67
  • 36.67
AEIR
  • AEIR
UBERON:0000057urethra
  • UBERON:0000104life cycle
1.50e4
  • 1.50e4
34.89
  • 34.89
AEIR
  • AEIR
UBERON:0004716conceptus
  • UBERON:0000068embryo stage
1.52e4
  • 1.52e4
34.16
  • 34.16
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.54e4
  • 1.54e4
  • 1.63e4
  • 1.63e4
33.31
  • 33.31
  • 29.40
  • 29.28
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.58e4
  • 1.58e4
  • 1.60e4
  • 1.66e4
31.57
  • 31.57
  • 30.44
  • 27.96
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
1.60e4
  • 1.60e4
30.70
  • 30.70
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.60e4
  • 1.60e4
  • 1.64e4
30.64
  • 30.64
  • 28.92
AEIR
  • AEIR
  • AEIR
UBERON:0005386olfactory segment of nasal mucosa
  • UBERON:0000104life cycle
1.66e4
  • 1.66e4
28.06
  • 28.06
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.70e4
  • 1.70e4
  • 1.80e4
26.33
  • 26.33
  • 21.89
AEIR
  • AEIR
  • AEIR
UBERON:0001913milk
  • UBERON:0000113post-juvenile adult stage
1.79e4
  • 1.79e4
22.22
  • 22.22
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSBTAG00000017216.

Cross-references

EnsemblENSBTAG00000017216 (FRMD5)
HGNCHGNC:28214 (FRMD5)
EMBLDAAA02052969
Uniprot/SPTREMBLF1MGE1, F1MGE1_BOVIN

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