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B. taurus Gene: IFITM3 - ENSBTAG00000019015 - Bos taurus (cattle)

General information

Ensembl IDENSBTAG00000019015
NameIFITM3
DescriptionBos taurus interferon induced transmembrane protein 3 (1-8U) (IFITM3), mRNA [Source:RefSeq mRNA;Acc:NM_181867]
OrganismBos taurus (cattle)
Orthologs(s)10 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
47.0
  • 47.0
  • 145
  • 280
  • 337
99.80
  • 99.80
  • 99.38
  • 98.79
  • 98.54
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
53.0
  • 53.0
  • 220
99.77
  • 99.77
  • 99.05
AEIR
  • AEIR
  • AEIR
CL:0000775neutrophil
  • UBERON:0018241prime adult stage
79.0
  • 79.0
99.66
  • 99.66
AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
92.6
  • 92.6
  • 161
  • 219
99.60
  • 99.60
  • 99.30
  • 99.06
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001826nasal cavity mucosa
  • UBERON:0000104life cycle
135
  • 135
99.42
  • 99.42
AEIR
  • AEIR
CL:0000503theca cell
  • UBERON:0018241prime adult stage
151
  • 151
99.35
  • 99.35
AEIR
  • AEIR
UBERON:0000051fornix of vagina
  • UBERON:0000104life cycle
163
  • 163
99.30
  • 99.30
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
166
  • 166
99.28
  • 99.28
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0000104life cycle
168
  • 168
99.28
  • 99.28
AEIR
  • AEIR
UBERON:0016632isthmus of fallopian tube
  • UBERON:0000104life cycle
172
  • 172
99.26
  • 99.26
AEIR
  • AEIR
UBERON:0000002uterine cervix
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
173
  • 173
  • 175
99.25
  • 99.25
  • 99.25
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
173
  • 173
99.25
  • 99.25
AEIR
  • AEIR
UBERON:0007625pigment epithelium of eye
  • UBERON:0000104life cycle
174
  • 174
99.25
  • 99.25
AEIR
  • AEIR
UBERON:0000056ureter
  • UBERON:0000104life cycle
186
  • 186
99.20
  • 99.20
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
190
  • 190
  • 260
99.18
  • 99.18
  • 98.88
AEIR
  • AEIR
  • AEIR
UBERON:0005386olfactory segment of nasal mucosa
  • UBERON:0000104life cycle
194
  • 194
99.16
  • 99.16
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
199
  • 199
  • 552
  • 1.21e4
99.14
  • 99.14
  • 97.61
  • 47.69
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
219
  • 219
  • 279
99.06
  • 99.06
  • 98.79
AEIR
  • AEIR
  • AEIR
UBERON:0007358abomasum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
223
  • 223
  • 225
99.04
  • 99.04
  • 99.03
AEIR
  • AEIR
  • AEIR
UBERON:0002247uterine horn
  • UBERON:0018241prime adult stage
223
  • 223
99.04
  • 99.04
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
240
  • 240
98.96
  • 98.96
AEIR
  • AEIR
UBERON:0000057urethra
  • UBERON:0000104life cycle
244
  • 244
98.95
  • 98.95
AEIR
  • AEIR
UBERON:0001000vas deferens
  • UBERON:0018241prime adult stage
246
  • 246
98.94
  • 98.94
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0000104life cycle
253
  • 253
98.91
  • 98.91
AEIR
  • AEIR
UBERON:0001296myometrium
  • UBERON:0000104life cycle
269
  • 269
98.84
  • 98.84
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0000104life cycle
284
  • 284
98.77
  • 98.77
AEIR
  • AEIR
UBERON:0004180mammary gland fat
  • UBERON:0018241prime adult stage
287
  • 287
98.76
  • 98.76
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
293
  • 293
98.73
  • 98.73
AEIR
  • AEIR
UBERON:0001103diaphragm
  • UBERON:0000104life cycle
293
  • 293
98.73
  • 98.73
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
299
  • 299
  • 344
  • 680
98.71
  • 98.71
  • 98.52
  • 97.06
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
301
  • 301
  • 1.80e3
98.70
  • 98.70
  • 92.22
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
306
  • 306
  • 471
98.68
  • 98.68
  • 97.96
AEIR
  • AEIR
  • AEIR
UBERON:0001739laryngeal cartilage
  • UBERON:0000104life cycle
310
  • 310
98.66
  • 98.66
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
310
  • 310
  • 411
98.66
  • 98.66
  • 98.22
AEIR
  • AEIR
  • AEIR
UBERON:0004703dorsal thalamus
  • UBERON:0018241prime adult stage
311
  • 311
98.66
  • 98.66
AEIR
  • AEIR
UBERON:0002198neurohypophysis
  • UBERON:0000104life cycle
313
  • 313
98.65
  • 98.65
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
322
  • 322
98.61
  • 98.61
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
339
  • 339
  • 1.05e3
98.53
  • 98.53
  • 95.45
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
349
  • 349
98.49
  • 98.49
AEIR
  • AEIR
UBERON:0003126trachea
  • UBERON:0000104life cycle
365
  • 365
98.42
  • 98.42
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
368
  • 368
  • 420
98.41
  • 98.41
  • 98.18
AEIR
  • AEIR
  • AEIR
UBERON:0015869retropharyngeal lymph node
  • UBERON:0000104life cycle
371
  • 371
98.40
  • 98.40
AEIR
  • AEIR
UBERON:0000378tongue muscle
  • UBERON:0000104life cycle
376
  • 376
98.37
  • 98.37
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0000104life cycle
378
  • 378
98.37
  • 98.37
AEIR
  • AEIR
UBERON:0002507abdominal lymph node
  • UBERON:0018241prime adult stage
426
  • 426
98.16
  • 98.16
AEIR
  • AEIR
UBERON:0016538temporal cortex
  • UBERON:0000104life cycle
430
  • 430
98.14
  • 98.14
AEIR
  • AEIR
UBERON:0002081cardiac atrium
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
434
  • 434
  • 439
98.12
  • 98.12
  • 98.10
AEIR
  • AEIR
  • AEIR
CL:0000711cumulus cell
  • UBERON:0000104life cycle
436
  • 436
98.11
  • 98.11
AEIR
  • AEIR
UBERON:0002110gall bladder
  • UBERON:0000104life cycle
443
  • 443
98.08
  • 98.08
AEIR
  • AEIR
UBERON:0001158descending colon
  • UBERON:0000104life cycle
462
  • 462
98.00
  • 98.00
AEIR
  • AEIR
UBERON:0002367prostate gland
  • UBERON:0018241prime adult stage
501
  • 501
97.83
  • 97.83
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
512
  • 512
97.79
  • 97.79
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
524
  • 524
  • 761
97.73
  • 97.73
  • 96.71
AEIR
  • AEIR
  • AEIR
UBERON:0001156ascending colon
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
525
  • 525
  • 527
97.73
  • 97.73
  • 97.72
AEIR
  • AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0018241prime adult stage
536
  • 536
97.68
  • 97.68
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
539
  • 539
  • 2.06e3
97.67
  • 97.67
  • 91.06
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
566
  • 566
97.55
  • 97.55
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
621
  • 621
97.31
  • 97.31
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
651
  • 651
97.18
  • 97.18
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000068embryo stage
683
  • 683
97.04
  • 97.04
AEIR
  • AEIR
UBERON:0003309floor plate of diencephalon
  • UBERON:0018241prime adult stage
697
  • 697
96.98
  • 96.98
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
699
  • 699
96.97
  • 96.97
AEIR
  • AEIR
UBERON:0012648ampulla of uterine tube
  • UBERON:0000104life cycle
733
  • 733
96.83
  • 96.83
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000104life cycle
736
  • 736
96.81
  • 96.81
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
747
  • 747
96.77
  • 96.77
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0018241prime adult stage
751
  • 751
96.75
  • 96.75
AEIR
  • AEIR
UBERON:0007367surface of tongue
  • UBERON:0000104life cycle
764
  • 764
96.69
  • 96.69
AEIR
  • AEIR
UBERON:0002196adenohypophysis
  • UBERON:0000104life cycle
813
  • 813
96.48
  • 96.48
AEIR
  • AEIR
UBERON:0007361ruminant reticulum
  • UBERON:0018241prime adult stage
932
  • 932
95.96
  • 95.96
AEIR
  • AEIR
UBERON:0002512corpus luteum
  • UBERON:0000104life cycle
950
  • 950
95.89
  • 95.89
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0018241prime adult stage
981
  • 981
95.75
  • 95.75
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000104life cycle
998
  • 998
95.68
  • 95.68
AEIR
  • AEIR
UBERON:0007362omasum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.03e3
  • 1.03e3
  • 1.04e3
95.53
  • 95.53
  • 95.49
AEIR
  • AEIR
  • AEIR
UBERON:0001913milk
  • UBERON:0000113post-juvenile adult stage
1.07e3
  • 1.07e3
95.39
  • 95.39
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0000104life cycle
1.11e3
  • 1.11e3
95.19
  • 95.19
AEIR
  • AEIR
UBERON:0001375semitendinosus
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.21e3
  • 1.21e3
  • 1.75e3
  • 1.97e3
94.75
  • 94.75
  • 92.43
  • 91.46
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.28e3
  • 1.28e3
94.48
  • 94.48
AEIR
  • AEIR
UBERON:0010153rumen papilla
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.40e3
  • 1.40e3
  • 1.43e3
93.94
  • 93.94
  • 93.81
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.49e3
  • 1.49e3
93.53
  • 93.53
AEIR
  • AEIR
UBERON:0001374biceps femoris
  • UBERON:0000104life cycle
1.57e3
  • 1.57e3
93.21
  • 93.21
AEIR
  • AEIR
UBERON:0004358caput epididymis
  • UBERON:0018241prime adult stage
1.58e3
  • 1.58e3
93.14
  • 93.14
AEIR
  • AEIR
UBERON:0003984uterine tube infundibulum
  • UBERON:0000104life cycle
1.62e3
  • 1.62e3
92.99
  • 92.99
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000104life cycle
1.66e3
  • 1.66e3
92.83
  • 92.83
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.71e3
  • 1.71e3
  • 1.74e3
92.60
  • 92.60
  • 92.47
AEIR
  • AEIR
  • AEIR
UBERON:0001477infraspinatus muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.76e3
  • 1.76e3
  • 1.77e3
92.39
  • 92.39
  • 92.34
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.77e3
  • 1.77e3
  • 4.95e3
  • 5.93e3
  • 1.37e4
92.31
  • 92.31
  • 78.56
  • 74.31
  • 40.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001381semimembranosus muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.83e3
  • 1.83e3
  • 2.44e3
92.06
  • 92.06
  • 89.45
AEIR
  • AEIR
  • AEIR
UBERON:0001886choroid plexus
  • UBERON:0018241prime adult stage
1.84e3
  • 1.84e3
92.04
  • 92.04
AEIR
  • AEIR
UBERON:0007365rumen
  • UBERON:0000112sexually immature stage
1.84e3
  • 1.84e3
92.03
  • 92.03
AEIR
  • AEIR
UBERON:0001378rectus femoris
  • UBERON:0000104life cycle
2.03e3
  • 2.03e3
91.20
  • 91.20
AEIR
  • AEIR
UBERON:0002383supraspinatus muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.05e3
  • 2.05e3
  • 2.09e3
91.13
  • 91.13
  • 90.95
AEIR
  • AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0000104life cycle
2.18e3
  • 2.18e3
90.55
  • 90.55
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.20e3
  • 2.20e3
  • 3.07e3
90.48
  • 90.48
  • 86.70
AEIR
  • AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0018241prime adult stage
2.26e3
  • 2.26e3
90.21
  • 90.21
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
2.33e3
  • 2.33e3
89.90
  • 89.90
AEIR
  • AEIR
UBERON:0001111intercostal muscle
  • UBERON:0000104life cycle
2.46e3
  • 2.46e3
89.34
  • 89.34
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
3.55e3
  • 3.55e3
84.63
  • 84.63
AEIR
  • AEIR
UBERON:0004716conceptus
  • UBERON:0000068embryo stage
4.01e3
  • 4.01e3
82.64
  • 82.64
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
4.83e3
  • 4.83e3
79.09
  • 79.09
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bovidae3 genesCompare expression

Paralogy information comes from OMA : ENSBTAG00000019015.

Cross-references

EnsemblENSBTAG00000019015 (IFITM3)
EMBLBC103086, DAAA02063795
Uniprot/SPTREMBLQ3ZBV6, Q3ZBV6_BOVIN

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