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B. taurus Gene: IFITM1 - ENSBTAG00000019017 - Bos taurus (cattle)

General information

Ensembl IDENSBTAG00000019017
NameIFITM1
Descriptioninterferon-induced transmembrane protein 1 (9-27) isoform 1 [Source:RefSeq peptide;Acc:NP_001071610]
OrganismBos taurus (cattle)
Orthologs(s)10 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000775neutrophil
  • UBERON:0018241prime adult stage
76.8
  • 76.8
99.67
  • 99.67
AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
83.1
  • 83.1
  • 152
  • 157
99.64
  • 99.64
  • 99.35
  • 99.32
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
103
  • 103
  • 833
99.56
  • 99.56
  • 96.39
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
109
  • 109
99.53
  • 99.53
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
109
  • 109
  • 234
  • 748
  • 798
99.53
  • 99.53
  • 98.99
  • 96.76
  • 96.54
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0015869retropharyngeal lymph node
  • UBERON:0000104life cycle
160
  • 160
99.31
  • 99.31
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0000104life cycle
182
  • 182
99.22
  • 99.22
AEIR
  • AEIR
UBERON:0002507abdominal lymph node
  • UBERON:0018241prime adult stage
184
  • 184
99.21
  • 99.21
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
189
  • 189
  • 1.24e3
99.19
  • 99.19
  • 94.63
AEIR
  • AEIR
  • AEIR
UBERON:0001826nasal cavity mucosa
  • UBERON:0000104life cycle
191
  • 191
99.18
  • 99.18
AEIR
  • AEIR
UBERON:0001156ascending colon
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
229
  • 229
  • 230
99.01
  • 99.01
  • 99.01
AEIR
  • AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0018241prime adult stage
229
  • 229
99.01
  • 99.01
AEIR
  • AEIR
UBERON:0000002uterine cervix
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
236
  • 236
  • 237
98.98
  • 98.98
  • 98.98
AEIR
  • AEIR
  • AEIR
UBERON:0001158descending colon
  • UBERON:0000104life cycle
241
  • 241
98.96
  • 98.96
AEIR
  • AEIR
UBERON:0007625pigment epithelium of eye
  • UBERON:0000104life cycle
257
  • 257
98.89
  • 98.89
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
260
  • 260
  • 510
98.88
  • 98.88
  • 97.80
AEIR
  • AEIR
  • AEIR
CL:0000503theca cell
  • UBERON:0018241prime adult stage
275
  • 275
98.81
  • 98.81
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0000104life cycle
278
  • 278
98.80
  • 98.80
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
284
  • 284
  • 518
98.77
  • 98.77
  • 97.76
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
316
  • 316
  • 328
98.63
  • 98.63
  • 98.58
AEIR
  • AEIR
  • AEIR
UBERON:0000051fornix of vagina
  • UBERON:0000104life cycle
346
  • 346
98.50
  • 98.50
AEIR
  • AEIR
UBERON:0000056ureter
  • UBERON:0000104life cycle
361
  • 361
98.44
  • 98.44
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
365
  • 365
  • 2.45e3
98.42
  • 98.42
  • 89.40
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
367
  • 367
  • 378
98.41
  • 98.41
  • 98.37
AEIR
  • AEIR
  • AEIR
UBERON:0002198neurohypophysis
  • UBERON:0000104life cycle
384
  • 384
98.34
  • 98.34
AEIR
  • AEIR
UBERON:0016538temporal cortex
  • UBERON:0000104life cycle
389
  • 389
98.32
  • 98.32
AEIR
  • AEIR
UBERON:0016632isthmus of fallopian tube
  • UBERON:0000104life cycle
406
  • 406
98.24
  • 98.24
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
415
  • 415
  • 779
98.21
  • 98.21
  • 96.63
AEIR
  • AEIR
  • AEIR
UBERON:0002110gall bladder
  • UBERON:0000104life cycle
425
  • 425
98.16
  • 98.16
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
429
  • 429
98.14
  • 98.14
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
477
  • 477
97.94
  • 97.94
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
482
  • 482
97.92
  • 97.92
AEIR
  • AEIR
UBERON:0000057urethra
  • UBERON:0000104life cycle
490
  • 490
97.88
  • 97.88
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
492
  • 492
  • 1.85e3
97.87
  • 97.87
  • 92.00
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
510
  • 510
  • 4.00e3
97.79
  • 97.79
  • 82.66
AEIR
  • AEIR
  • AEIR
UBERON:0001103diaphragm
  • UBERON:0000104life cycle
536
  • 536
97.68
  • 97.68
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0000104life cycle
542
  • 542
97.66
  • 97.66
AEIR
  • AEIR
UBERON:0004180mammary gland fat
  • UBERON:0018241prime adult stage
548
  • 548
97.63
  • 97.63
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
556
  • 556
97.59
  • 97.59
AEIR
  • AEIR
UBERON:0005386olfactory segment of nasal mucosa
  • UBERON:0000104life cycle
575
  • 575
97.51
  • 97.51
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0000104life cycle
591
  • 591
97.44
  • 97.44
AEIR
  • AEIR
UBERON:0002247uterine horn
  • UBERON:0018241prime adult stage
602
  • 602
97.40
  • 97.40
AEIR
  • AEIR
UBERON:0001296myometrium
  • UBERON:0000104life cycle
618
  • 618
97.33
  • 97.33
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
623
  • 623
97.30
  • 97.30
AEIR
  • AEIR
UBERON:0003126trachea
  • UBERON:0000104life cycle
724
  • 724
96.87
  • 96.87
AEIR
  • AEIR
UBERON:0001739laryngeal cartilage
  • UBERON:0000104life cycle
731
  • 731
96.84
  • 96.84
AEIR
  • AEIR
UBERON:0003309floor plate of diencephalon
  • UBERON:0018241prime adult stage
731
  • 731
96.84
  • 96.84
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
732
  • 732
96.83
  • 96.83
AEIR
  • AEIR
UBERON:0004703dorsal thalamus
  • UBERON:0018241prime adult stage
772
  • 772
96.66
  • 96.66
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000068embryo stage
773
  • 773
96.65
  • 96.65
AEIR
  • AEIR
UBERON:0001000vas deferens
  • UBERON:0018241prime adult stage
802
  • 802
96.53
  • 96.53
AEIR
  • AEIR
UBERON:0012648ampulla of uterine tube
  • UBERON:0000104life cycle
871
  • 871
96.23
  • 96.23
AEIR
  • AEIR
UBERON:0002367prostate gland
  • UBERON:0018241prime adult stage
884
  • 884
96.17
  • 96.17
AEIR
  • AEIR
UBERON:0000378tongue muscle
  • UBERON:0000104life cycle
886
  • 886
96.16
  • 96.16
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
942
  • 942
95.92
  • 95.92
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
973
  • 973
95.79
  • 95.79
AEIR
  • AEIR
UBERON:0002081cardiac atrium
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.01e3
  • 1.01e3
  • 1.01e3
95.64
  • 95.64
  • 95.61
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.23e3
  • 1.23e3
94.67
  • 94.67
AEIR
  • AEIR
UBERON:0007367surface of tongue
  • UBERON:0000104life cycle
1.25e3
  • 1.25e3
94.57
  • 94.57
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.29e3
  • 1.29e3
  • 2.91e3
  • 7.22e3
  • 7.87e3
94.43
  • 94.43
  • 87.41
  • 68.72
  • 65.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
1.31e3
  • 1.31e3
94.34
  • 94.34
AEIR
  • AEIR
UBERON:0002196adenohypophysis
  • UBERON:0000104life cycle
1.48e3
  • 1.48e3
93.59
  • 93.59
AEIR
  • AEIR
UBERON:0007358abomasum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.51e3
  • 1.51e3
  • 1.53e3
93.48
  • 93.48
  • 93.36
AEIR
  • AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0000104life cycle
1.52e3
  • 1.52e3
93.41
  • 93.41
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.61e3
  • 1.61e3
93.03
  • 93.03
AEIR
  • AEIR
UBERON:0001375semitendinosus
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.62e3
  • 1.62e3
  • 2.81e3
  • 3.12e3
92.98
  • 92.98
  • 87.81
  • 86.46
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0018241prime adult stage
1.69e3
  • 1.69e3
92.70
  • 92.70
AEIR
  • AEIR
UBERON:0001374biceps femoris
  • UBERON:0000104life cycle
1.86e3
  • 1.86e3
91.95
  • 91.95
AEIR
  • AEIR
UBERON:0002512corpus luteum
  • UBERON:0000104life cycle
1.87e3
  • 1.87e3
91.89
  • 91.89
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000104life cycle
1.92e3
  • 1.92e3
91.69
  • 91.69
AEIR
  • AEIR
UBERON:0007362omasum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.01e3
  • 2.01e3
  • 2.02e3
91.31
  • 91.31
  • 91.27
AEIR
  • AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0018241prime adult stage
2.01e3
  • 2.01e3
91.31
  • 91.31
AEIR
  • AEIR
UBERON:0007361ruminant reticulum
  • UBERON:0018241prime adult stage
2.11e3
  • 2.11e3
90.87
  • 90.87
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000104life cycle
2.11e3
  • 2.11e3
90.86
  • 90.86
AEIR
  • AEIR
CL:0000711cumulus cell
  • UBERON:0000104life cycle
2.17e3
  • 2.17e3
90.59
  • 90.59
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
2.18e3
  • 2.18e3
90.58
  • 90.58
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.25e3
  • 2.25e3
  • 3.00e3
  • 4.07e3
90.26
  • 90.26
  • 86.99
  • 82.36
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004358caput epididymis
  • UBERON:0018241prime adult stage
2.33e3
  • 2.33e3
89.93
  • 89.93
AEIR
  • AEIR
UBERON:0001381semimembranosus muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.38e3
  • 2.38e3
  • 3.22e3
89.68
  • 89.68
  • 86.07
AEIR
  • AEIR
  • AEIR
UBERON:0003984uterine tube infundibulum
  • UBERON:0000104life cycle
2.56e3
  • 2.56e3
88.91
  • 88.91
AEIR
  • AEIR
UBERON:0034908scapular muscle
  • UBERON:0000104life cycle
2.56e3
  • 2.56e3
88.90
  • 88.90
AEIR
  • AEIR
UBERON:0001111intercostal muscle
  • UBERON:0000104life cycle
2.58e3
  • 2.58e3
88.81
  • 88.81
AEIR
  • AEIR
UBERON:0001913milk
  • UBERON:0000113post-juvenile adult stage
2.59e3
  • 2.59e3
88.80
  • 88.80
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000104life cycle
2.66e3
  • 2.66e3
88.50
  • 88.50
AEIR
  • AEIR
UBERON:0008285rumen epithelium
  • UBERON:0018241prime adult stage
2.73e3
  • 2.73e3
88.15
  • 88.15
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0018241prime adult stage
2.89e3
  • 2.89e3
87.48
  • 87.48
AEIR
  • AEIR
UBERON:0010153rumen papilla
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.93e3
  • 2.93e3
  • 2.98e3
87.29
  • 87.29
  • 87.07
AEIR
  • AEIR
  • AEIR
UBERON:0002383supraspinatus muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.00e3
  • 3.00e3
  • 3.02e3
86.98
  • 86.98
  • 86.93
AEIR
  • AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0000104life cycle
3.07e3
  • 3.07e3
86.68
  • 86.68
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
3.13e3
  • 3.13e3
  • 3.15e3
86.45
  • 86.45
  • 86.35
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
3.13e3
  • 3.13e3
86.42
  • 86.42
AEIR
  • AEIR
UBERON:0007365rumen
  • UBERON:0000112sexually immature stage
3.21e3
  • 3.21e3
86.08
  • 86.08
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.69e3
  • 3.69e3
  • 4.78e3
83.99
  • 83.99
  • 79.30
AEIR
  • AEIR
  • AEIR
UBERON:0001477infraspinatus muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
3.90e3
  • 3.90e3
  • 3.91e3
83.09
  • 83.09
  • 83.06
AEIR
  • AEIR
  • AEIR
UBERON:0001378rectus femoris
  • UBERON:0000104life cycle
3.91e3
  • 3.91e3
83.06
  • 83.06
AEIR
  • AEIR
UBERON:0001886choroid plexus
  • UBERON:0018241prime adult stage
7.24e3
  • 7.24e3
68.63
  • 68.63
AEIR
  • AEIR
UBERON:0004716conceptus
  • UBERON:0000068embryo stage
1.13e4
  • 1.13e4
50.84
  • 50.84
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bovidae3 genesCompare expression

Paralogy information comes from OMA : ENSBTAG00000019017.

Cross-references

EnsemblENSBTAG00000019017 (IFITM1)
EMBLBC102339, DAAA02032477
Uniprot/SPTREMBLQ3ZCG5, Q3ZCG5_BOVIN

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