B. taurus Gene: SYN3 - ENSBTAG00000020636 - Bos taurus (cattle)

General information

Ensembl IDENSBTAG00000020636
NameSYN3
Descriptionsynapsin III [Source:HGNC Symbol;Acc:HGNC:11496]
OrganismBos taurus (cattle)
Orthologs(s)5 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0018241prime adult stage
7.59e3
  • 7.59e3
67.12
  • 67.12
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
8.14e3
  • 8.14e3
  • 8.16e3
64.74
  • 64.74
  • 64.64
AEIR
  • AEIR
  • AEIR
UBERON:0001886choroid plexus
  • UBERON:0018241prime adult stage
8.91e3
  • 8.91e3
61.38
  • 61.38
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
9.16e3
  • 9.16e3
60.32
  • 60.32
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0018241prime adult stage
9.46e3
  • 9.46e3
59.00
  • 59.00
AEIR
  • AEIR
UBERON:0001103diaphragm
  • UBERON:0000104life cycle
9.52e3
  • 9.52e3
58.74
  • 58.74
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
9.59e3
  • 9.59e3
58.44
  • 58.44
AEIR
  • AEIR
UBERON:0001378rectus femoris
  • UBERON:0000104life cycle
9.96e3
  • 9.96e3
56.82
  • 56.82
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.03e4
  • 1.03e4
  • 1.15e4
  • 1.18e4
55.28
  • 55.28
  • 50.13
  • 48.83
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000104life cycle
1.06e4
  • 1.06e4
54.13
  • 54.13
AEIR
  • AEIR
UBERON:0002383supraspinatus muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.09e4
  • 1.09e4
  • 1.10e4
52.84
  • 52.84
  • 52.40
AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
52.43
  • 52.43
AEIR
  • AEIR
UBERON:0001381semimembranosus muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.10e4
  • 1.10e4
  • 1.20e4
52.15
  • 52.15
  • 48.09
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.13e4
  • 1.13e4
  • 1.32e4
50.85
  • 50.85
  • 42.85
AEIR
  • AEIR
  • AEIR
UBERON:0002512corpus luteum
  • UBERON:0000104life cycle
1.16e4
  • 1.16e4
49.68
  • 49.68
AEIR
  • AEIR
UBERON:0001375semitendinosus
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.17e4
  • 1.17e4
  • 1.27e4
  • 1.46e4
49.41
  • 49.41
  • 44.78
  • 36.90
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001477infraspinatus muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.18e4
  • 1.18e4
  • 1.18e4
48.87
  • 48.87
  • 48.71
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.19e4
  • 1.19e4
  • 1.36e4
48.60
  • 48.60
  • 41.19
AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.21e4
  • 1.21e4
  • 1.34e4
  • 1.50e4
47.69
  • 47.69
  • 42.11
  • 34.81
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003309floor plate of diencephalon
  • UBERON:0018241prime adult stage
1.21e4
  • 1.21e4
47.59
  • 47.59
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
1.21e4
  • 1.21e4
47.41
  • 47.41
AEIR
  • AEIR
UBERON:0012648ampulla of uterine tube
  • UBERON:0000104life cycle
1.22e4
  • 1.22e4
47.09
  • 47.09
AEIR
  • AEIR
UBERON:0002196adenohypophysis
  • UBERON:0000104life cycle
1.22e4
  • 1.22e4
46.98
  • 46.98
AEIR
  • AEIR
UBERON:0000051fornix of vagina
  • UBERON:0000104life cycle
1.25e4
  • 1.25e4
45.84
  • 45.84
AEIR
  • AEIR
UBERON:0002367prostate gland
  • UBERON:0018241prime adult stage
1.25e4
  • 1.25e4
45.69
  • 45.69
AEIR
  • AEIR
UBERON:0002110gall bladder
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
45.34
  • 45.34
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.27e4
  • 1.27e4
45.04
  • 45.04
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.28e4
  • 1.28e4
44.55
  • 44.55
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.29e4
  • 1.29e4
  • 1.40e4
44.14
  • 44.14
  • 39.37
AEIR
  • AEIR
  • AEIR
UBERON:0001111intercostal muscle
  • UBERON:0000104life cycle
1.29e4
  • 1.29e4
43.99
  • 43.99
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.29e4
  • 1.29e4
  • 1.94e4
43.97
  • 43.97
  • 16.07
AEIR
  • AEIR
  • AEIR
UBERON:0007625pigment epithelium of eye
  • UBERON:0000104life cycle
1.30e4
  • 1.30e4
43.80
  • 43.80
AEIR
  • AEIR
UBERON:0016538temporal cortex
  • UBERON:0000104life cycle
1.30e4
  • 1.30e4
43.67
  • 43.67
AEIR
  • AEIR
UBERON:0001739laryngeal cartilage
  • UBERON:0000104life cycle
1.31e4
  • 1.31e4
43.28
  • 43.28
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.31e4
  • 1.31e4
43.21
  • 43.21
AEIR
  • AEIR
UBERON:0002081cardiac atrium
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.31e4
  • 1.31e4
  • 1.31e4
43.11
  • 43.11
  • 43.04
AEIR
  • AEIR
  • AEIR
UBERON:0001000vas deferens
  • UBERON:0018241prime adult stage
1.31e4
  • 1.31e4
43.02
  • 43.02
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.32e4
  • 1.32e4
42.72
  • 42.72
AEIR
  • AEIR
UBERON:0004358caput epididymis
  • UBERON:0018241prime adult stage
1.33e4
  • 1.33e4
42.25
  • 42.25
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000068embryo stage
1.34e4
  • 1.34e4
42.10
  • 42.10
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0000104life cycle
1.34e4
  • 1.34e4
41.99
  • 41.99
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.35e4
  • 1.35e4
41.57
  • 41.57
AEIR
  • AEIR
UBERON:0002247uterine horn
  • UBERON:0018241prime adult stage
1.35e4
  • 1.35e4
41.44
  • 41.44
AEIR
  • AEIR
UBERON:0002198neurohypophysis
  • UBERON:0000104life cycle
1.36e4
  • 1.36e4
41.13
  • 41.13
AEIR
  • AEIR
UBERON:0003984uterine tube infundibulum
  • UBERON:0000104life cycle
1.36e4
  • 1.36e4
41.05
  • 41.05
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.37e4
  • 1.37e4
  • 1.41e4
  • 1.70e4
40.61
  • 40.61
  • 39.05
  • 26.52
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.37e4
  • 1.37e4
  • 1.56e4
40.50
  • 40.50
  • 32.27
AEIR
  • AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.38e4
  • 1.38e4
  • 1.50e4
  • 1.53e4
40.31
  • 40.31
  • 35.05
  • 33.58
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000104life cycle
1.38e4
  • 1.38e4
40.06
  • 40.06
AEIR
  • AEIR
UBERON:0007367surface of tongue
  • UBERON:0000104life cycle
1.39e4
  • 1.39e4
39.65
  • 39.65
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.40e4
  • 1.40e4
  • 1.44e4
39.49
  • 39.49
  • 37.43
AEIR
  • AEIR
  • AEIR
UBERON:0000378tongue muscle
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
38.91
  • 38.91
AEIR
  • AEIR
UBERON:0016632isthmus of fallopian tube
  • UBERON:0000104life cycle
1.42e4
  • 1.42e4
38.54
  • 38.54
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.42e4
  • 1.42e4
  • 1.50e4
38.49
  • 38.49
  • 35.00
AEIR
  • AEIR
  • AEIR
UBERON:0007362omasum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.44e4
  • 1.44e4
  • 1.45e4
37.50
  • 37.50
  • 37.02
AEIR
  • AEIR
  • AEIR
UBERON:0007361ruminant reticulum
  • UBERON:0018241prime adult stage
1.46e4
  • 1.46e4
36.93
  • 36.93
AEIR
  • AEIR
UBERON:0008285rumen epithelium
  • UBERON:0018241prime adult stage
1.47e4
  • 1.47e4
36.19
  • 36.19
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0000104life cycle
1.48e4
  • 1.48e4
36.00
  • 36.00
AEIR
  • AEIR
UBERON:0004180mammary gland fat
  • UBERON:0018241prime adult stage
1.49e4
  • 1.49e4
35.27
  • 35.27
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0000104life cycle
1.51e4
  • 1.51e4
34.64
  • 34.64
AEIR
  • AEIR
UBERON:0000057urethra
  • UBERON:0000104life cycle
1.51e4
  • 1.51e4
34.51
  • 34.51
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
1.54e4
  • 1.54e4
33.08
  • 33.08
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.59e4
  • 1.59e4
  • 1.60e4
31.21
  • 31.21
  • 30.61
AEIR
  • AEIR
  • AEIR
CL:0000503theca cell
  • UBERON:0018241prime adult stage
1.61e4
  • 1.61e4
30.44
  • 30.44
AEIR
  • AEIR
UBERON:0004716conceptus
  • UBERON:0000068embryo stage
1.67e4
  • 1.67e4
27.53
  • 27.53
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0018241prime adult stage
1.71e4
  • 1.71e4
25.69
  • 25.69
AEIR
  • AEIR
UBERON:0005386olfactory segment of nasal mucosa
  • UBERON:0000104life cycle
1.78e4
  • 1.78e4
22.97
  • 22.97
AEIR
  • AEIR
UBERON:0001913milk
  • UBERON:0000113post-juvenile adult stage
1.82e4
  • 1.82e4
21.13
  • 21.13
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSBTAG00000020636 (SYN3)
HGNCHGNC:11496 (SYN3)
EMBLDAAA02013759
Uniprot/SPTREMBLF1MCX8, F1MCX8_BOVIN

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