B. taurus Gene: TRIM8 - ENSBTAG00000021071 - Bos taurus (cattle)

General information

Ensembl IDENSBTAG00000021071
NameTRIM8
Descriptiontripartite motif containing 8 [Source:HGNC Symbol;Acc:HGNC:15579]
OrganismBos taurus (cattle)
Synonym(s)gerp, rnf27
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0007625pigment epithelium of eye
  • UBERON:0000104life cycle
938
  • 938
95.94
  • 95.94
AEIR
  • AEIR
UBERON:0002367prostate gland
  • UBERON:0018241prime adult stage
1.49e3
  • 1.49e3
93.53
  • 93.53
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.56e3
  • 1.56e3
93.25
  • 93.25
AEIR
  • AEIR
UBERON:0016538temporal cortex
  • UBERON:0000104life cycle
1.70e3
  • 1.70e3
92.63
  • 92.63
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.71e3
  • 1.71e3
  • 2.37e3
92.61
  • 92.61
  • 89.71
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.77e3
  • 1.77e3
  • 4.40e3
92.35
  • 92.35
  • 80.95
AEIR
  • AEIR
  • AEIR
UBERON:0001000vas deferens
  • UBERON:0018241prime adult stage
1.90e3
  • 1.90e3
91.76
  • 91.76
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
2.14e3
  • 2.14e3
90.75
  • 90.75
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0000104life cycle
2.17e3
  • 2.17e3
90.60
  • 90.60
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
2.17e3
  • 2.17e3
90.59
  • 90.59
AEIR
  • AEIR
UBERON:0005386olfactory segment of nasal mucosa
  • UBERON:0000104life cycle
2.19e3
  • 2.19e3
90.52
  • 90.52
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.30e3
  • 2.30e3
  • 3.06e3
90.05
  • 90.05
  • 86.73
AEIR
  • AEIR
  • AEIR
UBERON:0000051fornix of vagina
  • UBERON:0000104life cycle
2.33e3
  • 2.33e3
89.92
  • 89.92
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000068embryo stage
2.39e3
  • 2.39e3
89.64
  • 89.64
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
2.46e3
  • 2.46e3
  • 3.50e3
  • 3.54e3
  • 6.47e3
89.36
  • 89.36
  • 84.82
  • 84.67
  • 71.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.49e3
  • 2.49e3
  • 2.77e3
  • 3.06e3
89.21
  • 89.21
  • 88.00
  • 86.75
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003309floor plate of diencephalon
  • UBERON:0018241prime adult stage
2.64e3
  • 2.64e3
88.57
  • 88.57
AEIR
  • AEIR
UBERON:0003126trachea
  • UBERON:0000104life cycle
2.65e3
  • 2.65e3
88.53
  • 88.53
AEIR
  • AEIR
UBERON:0012648ampulla of uterine tube
  • UBERON:0000104life cycle
2.72e3
  • 2.72e3
88.23
  • 88.23
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000104life cycle
2.76e3
  • 2.76e3
88.06
  • 88.06
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
2.86e3
  • 2.86e3
87.59
  • 87.59
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.89e3
  • 2.89e3
  • 3.32e3
87.50
  • 87.50
  • 85.62
AEIR
  • AEIR
  • AEIR
UBERON:0004180mammary gland fat
  • UBERON:0018241prime adult stage
2.89e3
  • 2.89e3
87.49
  • 87.49
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0000104life cycle
2.90e3
  • 2.90e3
87.43
  • 87.43
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0000104life cycle
3.00e3
  • 3.00e3
87.01
  • 87.01
AEIR
  • AEIR
UBERON:0000002uterine cervix
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
3.10e3
  • 3.10e3
  • 3.11e3
86.57
  • 86.57
  • 86.54
AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
3.10e3
  • 3.10e3
86.57
  • 86.57
AEIR
  • AEIR
UBERON:0000057urethra
  • UBERON:0000104life cycle
3.17e3
  • 3.17e3
86.29
  • 86.29
AEIR
  • AEIR
UBERON:0002198neurohypophysis
  • UBERON:0000104life cycle
3.17e3
  • 3.17e3
86.25
  • 86.25
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.18e3
  • 3.18e3
  • 4.39e3
86.24
  • 86.24
  • 81.00
AEIR
  • AEIR
  • AEIR
UBERON:0000056ureter
  • UBERON:0000104life cycle
3.21e3
  • 3.21e3
86.08
  • 86.08
AEIR
  • AEIR
UBERON:0010153rumen papilla
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.25e3
  • 3.25e3
  • 3.29e3
85.94
  • 85.94
  • 85.73
AEIR
  • AEIR
  • AEIR
UBERON:0034908scapular muscle
  • UBERON:0000104life cycle
3.33e3
  • 3.33e3
85.59
  • 85.59
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
3.38e3
  • 3.38e3
  • 3.90e3
85.36
  • 85.36
  • 83.09
AEIR
  • AEIR
  • AEIR
UBERON:0007358abomasum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.47e3
  • 3.47e3
  • 3.51e3
84.96
  • 84.96
  • 84.80
AEIR
  • AEIR
  • AEIR
UBERON:0001158descending colon
  • UBERON:0000104life cycle
3.51e3
  • 3.51e3
84.79
  • 84.79
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
3.53e3
  • 3.53e3
  • 5.63e3
84.69
  • 84.69
  • 75.61
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
3.54e3
  • 3.54e3
84.66
  • 84.66
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000104life cycle
3.56e3
  • 3.56e3
84.58
  • 84.58
AEIR
  • AEIR
UBERON:0002196adenohypophysis
  • UBERON:0000104life cycle
3.59e3
  • 3.59e3
84.45
  • 84.45
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0000104life cycle
3.64e3
  • 3.64e3
84.21
  • 84.21
AEIR
  • AEIR
UBERON:0002000gluteal muscle
  • UBERON:0000104life cycle
3.65e3
  • 3.65e3
84.17
  • 84.17
AEIR
  • AEIR
UBERON:0003984uterine tube infundibulum
  • UBERON:0000104life cycle
3.69e3
  • 3.69e3
84.02
  • 84.02
AEIR
  • AEIR
UBERON:0007361ruminant reticulum
  • UBERON:0018241prime adult stage
3.92e3
  • 3.92e3
83.00
  • 83.00
AEIR
  • AEIR
UBERON:0001156ascending colon
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
4.06e3
  • 4.06e3
  • 4.09e3
82.42
  • 82.42
  • 82.29
AEIR
  • AEIR
  • AEIR
UBERON:0001739laryngeal cartilage
  • UBERON:0000104life cycle
4.06e3
  • 4.06e3
82.41
  • 82.41
AEIR
  • AEIR
UBERON:0007367surface of tongue
  • UBERON:0000104life cycle
4.23e3
  • 4.23e3
81.66
  • 81.66
AEIR
  • AEIR
UBERON:0001111intercostal muscle
  • UBERON:0000104life cycle
4.24e3
  • 4.24e3
81.62
  • 81.62
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
4.31e3
  • 4.31e3
  • 6.46e3
81.33
  • 81.33
  • 72.03
AEIR
  • AEIR
  • AEIR
UBERON:0002081cardiac atrium
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
4.31e3
  • 4.31e3
  • 4.37e3
81.31
  • 81.31
  • 81.08
AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
4.32e3
  • 4.32e3
  • 5.04e3
81.30
  • 81.30
  • 78.17
AEIR
  • AEIR
  • AEIR
CL:0000503theca cell
  • UBERON:0018241prime adult stage
4.39e3
  • 4.39e3
80.98
  • 80.98
AEIR
  • AEIR
UBERON:0016632isthmus of fallopian tube
  • UBERON:0000104life cycle
4.51e3
  • 4.51e3
80.45
  • 80.45
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0018241prime adult stage
4.63e3
  • 4.63e3
79.93
  • 79.93
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
4.67e3
  • 4.67e3
79.76
  • 79.76
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0018241prime adult stage
4.76e3
  • 4.76e3
79.37
  • 79.37
AEIR
  • AEIR
UBERON:0007362omasum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
4.88e3
  • 4.88e3
  • 4.90e3
78.86
  • 78.86
  • 78.77
AEIR
  • AEIR
  • AEIR
UBERON:0007365rumen
  • UBERON:0000112sexually immature stage
4.89e3
  • 4.89e3
78.82
  • 78.82
AEIR
  • AEIR
UBERON:0001296myometrium
  • UBERON:0000104life cycle
4.95e3
  • 4.95e3
78.56
  • 78.56
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0000104life cycle
5.03e3
  • 5.03e3
78.21
  • 78.21
AEIR
  • AEIR
UBERON:0001103diaphragm
  • UBERON:0000104life cycle
5.08e3
  • 5.08e3
77.98
  • 77.98
AEIR
  • AEIR
UBERON:0001886choroid plexus
  • UBERON:0018241prime adult stage
5.16e3
  • 5.16e3
77.63
  • 77.63
AEIR
  • AEIR
UBERON:0002512corpus luteum
  • UBERON:0000104life cycle
5.20e3
  • 5.20e3
77.47
  • 77.47
AEIR
  • AEIR
UBERON:0001375semitendinosus
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
5.23e3
  • 5.23e3
  • 5.27e3
  • 6.12e3
77.35
  • 77.35
  • 77.15
  • 73.49
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
5.27e3
  • 5.27e3
  • 5.72e3
77.15
  • 77.15
  • 75.22
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
5.30e3
  • 5.30e3
77.03
  • 77.03
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0018241prime adult stage
5.31e3
  • 5.31e3
76.99
  • 76.99
AEIR
  • AEIR
UBERON:0001381semimembranosus muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
5.40e3
  • 5.40e3
  • 5.77e3
76.59
  • 76.59
  • 74.98
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
5.50e3
  • 5.50e3
  • 5.64e3
  • 5.76e3
76.15
  • 76.15
  • 75.54
  • 75.03
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
5.57e3
  • 5.57e3
  • 5.58e3
75.87
  • 75.87
  • 75.84
AEIR
  • AEIR
  • AEIR
UBERON:0001374biceps femoris
  • UBERON:0000104life cycle
5.71e3
  • 5.71e3
75.25
  • 75.25
AEIR
  • AEIR
UBERON:0004703dorsal thalamus
  • UBERON:0018241prime adult stage
5.73e3
  • 5.73e3
75.19
  • 75.19
AEIR
  • AEIR
UBERON:0001913milk
  • UBERON:0000113post-juvenile adult stage
5.82e3
  • 5.82e3
74.77
  • 74.77
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0018241prime adult stage
5.84e3
  • 5.84e3
74.71
  • 74.71
AEIR
  • AEIR
UBERON:0001378rectus femoris
  • UBERON:0000104life cycle
5.88e3
  • 5.88e3
74.50
  • 74.50
AEIR
  • AEIR
UBERON:0002247uterine horn
  • UBERON:0018241prime adult stage
5.96e3
  • 5.96e3
74.15
  • 74.15
AEIR
  • AEIR
UBERON:0002110gall bladder
  • UBERON:0000104life cycle
6.04e3
  • 6.04e3
73.82
  • 73.82
AEIR
  • AEIR
UBERON:0001477infraspinatus muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
6.06e3
  • 6.06e3
  • 6.06e3
73.75
  • 73.75
  • 73.74
AEIR
  • AEIR
  • AEIR
CL:0000775neutrophil
  • UBERON:0018241prime adult stage
6.10e3
  • 6.10e3
73.54
  • 73.54
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
6.19e3
  • 6.19e3
73.16
  • 73.16
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
6.24e3
  • 6.24e3
72.95
  • 72.95
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0000104life cycle
6.36e3
  • 6.36e3
72.45
  • 72.45
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
6.36e3
  • 6.36e3
  • 6.76e3
72.44
  • 72.44
  • 70.72
AEIR
  • AEIR
  • AEIR
UBERON:0002383supraspinatus muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
6.46e3
  • 6.46e3
  • 6.48e3
71.99
  • 71.99
  • 71.92
AEIR
  • AEIR
  • AEIR
UBERON:0015869retropharyngeal lymph node
  • UBERON:0000104life cycle
6.72e3
  • 6.72e3
70.87
  • 70.87
AEIR
  • AEIR
UBERON:0000378tongue muscle
  • UBERON:0000104life cycle
6.73e3
  • 6.73e3
70.82
  • 70.82
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
7.03e3
  • 7.03e3
69.53
  • 69.53
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000104life cycle
7.20e3
  • 7.20e3
68.80
  • 68.80
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
7.72e3
  • 7.72e3
66.55
  • 66.55
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
7.96e3
  • 7.96e3
65.51
  • 65.51
AEIR
  • AEIR
UBERON:0004358caput epididymis
  • UBERON:0018241prime adult stage
8.30e3
  • 8.30e3
64.05
  • 64.05
AEIR
  • AEIR
UBERON:0004716conceptus
  • UBERON:0000068embryo stage
1.02e4
  • 1.02e4
55.98
  • 55.98
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.02e4
  • 1.02e4
  • 1.04e4
  • 1.05e4
  • 1.37e4
55.84
  • 55.84
  • 55.03
  • 54.58
  • 40.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000711cumulus cell
  • UBERON:0000104life cycle
1.54e4
  • 1.54e4
33.28
  • 33.28
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species18 genesCompare expression

Orthology information comes from OMA : ENSBTAG00000021071.

Cross-references

EnsemblENSBTAG00000021071 (TRIM8)
HGNCHGNC:15579 (TRIM8)
EMBLDAAA02059021
Uniprot/SPTREMBLE1BJC6, E1BJC6_BOVIN

Do not show this banner again