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B. taurus Gene: SLC8A3 - ENSBTAG00000027080 - Bos taurus (cattle)

General information

Ensembl IDENSBTAG00000027080
NameSLC8A3
Descriptionsolute carrier family 8 (sodium/calcium exchanger), member 3 [Source:HGNC Symbol;Acc:HGNC:11070]
OrganismBos taurus (cattle)
Synonym(s)ncx3
Orthologs(s)24 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002000gluteal muscle
  • UBERON:0000104life cycle
2.15e3
  • 2.15e3
90.70
  • 90.70
AEIR
  • AEIR
UBERON:0034908scapular muscle
  • UBERON:0000104life cycle
2.74e3
  • 2.74e3
88.12
  • 88.12
AEIR
  • AEIR
UBERON:0001375semitendinosus
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
3.96e3
  • 3.96e3
  • 5.45e3
  • 1.10e4
82.84
  • 82.84
  • 76.37
  • 52.17
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001477infraspinatus muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
4.00e3
  • 4.00e3
  • 4.00e3
82.67
  • 82.67
  • 82.65
AEIR
  • AEIR
  • AEIR
UBERON:0001378rectus femoris
  • UBERON:0000104life cycle
4.27e3
  • 4.27e3
81.48
  • 81.48
AEIR
  • AEIR
UBERON:0001374biceps femoris
  • UBERON:0000104life cycle
4.42e3
  • 4.42e3
80.84
  • 80.84
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
4.45e3
  • 4.45e3
  • 4.61e3
80.73
  • 80.73
  • 80.01
AEIR
  • AEIR
  • AEIR
UBERON:0002383supraspinatus muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
4.69e3
  • 4.69e3
  • 4.71e3
79.66
  • 79.66
  • 79.61
AEIR
  • AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000104life cycle
4.86e3
  • 4.86e3
78.95
  • 78.95
AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
4.89e3
  • 4.89e3
  • 4.93e3
78.83
  • 78.83
  • 78.62
AEIR
  • AEIR
  • AEIR
UBERON:0001381semimembranosus muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
4.96e3
  • 4.96e3
  • 7.06e3
78.52
  • 78.52
  • 69.40
AEIR
  • AEIR
  • AEIR
UBERON:0002512corpus luteum
  • UBERON:0000104life cycle
5.03e3
  • 5.03e3
78.18
  • 78.18
AEIR
  • AEIR
UBERON:0001886choroid plexus
  • UBERON:0018241prime adult stage
5.17e3
  • 5.17e3
77.61
  • 77.61
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
5.97e3
  • 5.97e3
  • 1.38e4
74.13
  • 74.13
  • 40.12
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
7.16e3
  • 7.16e3
68.95
  • 68.95
AEIR
  • AEIR
UBERON:0001111intercostal muscle
  • UBERON:0000104life cycle
8.78e3
  • 8.78e3
61.97
  • 61.97
AEIR
  • AEIR
UBERON:0001739laryngeal cartilage
  • UBERON:0000104life cycle
9.19e3
  • 9.19e3
60.17
  • 60.17
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
9.82e3
  • 9.82e3
57.42
  • 57.42
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.01e4
  • 1.01e4
  • 1.25e4
56.18
  • 56.18
  • 45.69
AEIR
  • AEIR
  • AEIR
UBERON:0000378tongue muscle
  • UBERON:0000104life cycle
1.04e4
  • 1.04e4
55.13
  • 55.13
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.06e4
  • 1.06e4
54.06
  • 54.06
AEIR
  • AEIR
UBERON:0003309floor plate of diencephalon
  • UBERON:0018241prime adult stage
1.06e4
  • 1.06e4
53.90
  • 53.90
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000104life cycle
1.11e4
  • 1.11e4
51.74
  • 51.74
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0018241prime adult stage
1.17e4
  • 1.17e4
49.38
  • 49.38
AEIR
  • AEIR
UBERON:0007367surface of tongue
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
48.66
  • 48.66
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0018241prime adult stage
1.19e4
  • 1.19e4
48.29
  • 48.29
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0000104life cycle
1.20e4
  • 1.20e4
47.87
  • 47.87
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000068embryo stage
1.21e4
  • 1.21e4
47.51
  • 47.51
AEIR
  • AEIR
UBERON:0016538temporal cortex
  • UBERON:0000104life cycle
1.27e4
  • 1.27e4
44.92
  • 44.92
AEIR
  • AEIR
UBERON:0003126trachea
  • UBERON:0000104life cycle
1.29e4
  • 1.29e4
43.91
  • 43.91
AEIR
  • AEIR
UBERON:0003984uterine tube infundibulum
  • UBERON:0000104life cycle
1.31e4
  • 1.31e4
43.13
  • 43.13
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
  • 1.56e4
42.97
  • 42.97
  • 32.37
AEIR
  • AEIR
  • AEIR
UBERON:0007361ruminant reticulum
  • UBERON:0018241prime adult stage
1.34e4
  • 1.34e4
41.99
  • 41.99
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.35e4
  • 1.35e4
  • 1.48e4
41.61
  • 41.61
  • 35.65
AEIR
  • AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.35e4
  • 1.35e4
  • 1.42e4
  • 1.51e4
41.41
  • 41.41
  • 38.39
  • 34.45
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.36e4
  • 1.36e4
41.16
  • 41.16
AEIR
  • AEIR
UBERON:0001156ascending colon
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.36e4
  • 1.36e4
  • 1.36e4
40.98
  • 40.98
  • 40.97
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.37e4
  • 1.37e4
  • 1.61e4
  • 1.61e4
40.61
  • 40.61
  • 30.09
  • 30.06
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004716conceptus
  • UBERON:0000068embryo stage
1.37e4
  • 1.37e4
40.50
  • 40.50
AEIR
  • AEIR
UBERON:0007358abomasum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.41e4
  • 1.41e4
  • 1.41e4
38.84
  • 38.84
  • 38.75
AEIR
  • AEIR
  • AEIR
UBERON:0007362omasum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.44e4
  • 1.44e4
  • 1.45e4
37.69
  • 37.69
  • 37.12
AEIR
  • AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0000104life cycle
1.45e4
  • 1.45e4
37.28
  • 37.28
AEIR
  • AEIR
UBERON:0012648ampulla of uterine tube
  • UBERON:0000104life cycle
1.46e4
  • 1.46e4
36.88
  • 36.88
AEIR
  • AEIR
UBERON:0001158descending colon
  • UBERON:0000104life cycle
1.46e4
  • 1.46e4
36.68
  • 36.68
AEIR
  • AEIR
UBERON:0000056ureter
  • UBERON:0000104life cycle
1.48e4
  • 1.48e4
35.75
  • 35.75
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.49e4
  • 1.49e4
  • 1.94e4
35.43
  • 35.43
  • 16.07
AEIR
  • AEIR
  • AEIR
UBERON:0007365rumen
  • UBERON:0000112sexually immature stage
1.50e4
  • 1.50e4
35.11
  • 35.11
AEIR
  • AEIR
UBERON:0007625pigment epithelium of eye
  • UBERON:0000104life cycle
1.50e4
  • 1.50e4
34.86
  • 34.86
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.51e4
  • 1.51e4
  • 1.72e4
34.46
  • 34.46
  • 25.46
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.54e4
  • 1.54e4
  • 1.66e4
33.09
  • 33.09
  • 27.98
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.58e4
  • 1.58e4
31.51
  • 31.51
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.59e4
  • 1.59e4
31.19
  • 31.19
AEIR
  • AEIR
UBERON:0005386olfactory segment of nasal mucosa
  • UBERON:0000104life cycle
1.60e4
  • 1.60e4
30.86
  • 30.86
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
1.65e4
  • 1.65e4
28.54
  • 28.54
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.69e4
  • 1.69e4
  • 1.72e4
26.76
  • 26.76
  • 25.46
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
1.70e4
  • 1.70e4
26.36
  • 26.36
AEIR
  • AEIR
UBERON:0001913milk
  • UBERON:0000113post-juvenile adult stage
1.86e4
  • 1.86e4
19.40
  • 19.40
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression
Bilateria23 species24 genesCompare expression

Orthology information comes from OMA : ENSBTAG00000027080.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata2 genesCompare expression

Paralogy information comes from OMA : ENSBTAG00000027080.

Cross-references

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