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B. taurus Gene: TFF2 - ENSBTAG00000030814 - Bos taurus (cattle)

General information

Ensembl IDENSBTAG00000030814
NameTFF2
Descriptiontrefoil factor 2 [Source:HGNC Symbol;Acc:HGNC:11756]
OrganismBos taurus (cattle)
Synonym(s)sml1
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001156ascending colon
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.00
  • 3.00
  • 3.00
99.99
  • 99.99
  • 99.99
AEIR
  • AEIR
  • AEIR
UBERON:0007358abomasum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
6.00
  • 6.00
  • 6.00
99.98
  • 99.98
  • 99.98
AEIR
  • AEIR
  • AEIR
UBERON:0001158descending colon
  • UBERON:0000104life cycle
9.00
  • 9.00
99.97
  • 99.97
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
19.0
  • 19.0
  • 1.91e4
99.92
  • 99.92
  • 17.08
AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0000104life cycle
88.0
  • 88.0
99.62
  • 99.62
AEIR
  • AEIR
UBERON:0000056ureter
  • UBERON:0000104life cycle
328
  • 328
98.58
  • 98.58
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0000104life cycle
489
  • 489
97.88
  • 97.88
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000104life cycle
1.89e3
  • 1.89e3
91.80
  • 91.80
AEIR
  • AEIR
UBERON:0001374biceps femoris
  • UBERON:0000104life cycle
2.70e3
  • 2.70e3
88.30
  • 88.30
AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
4.11e3
  • 4.11e3
  • 7.82e3
  • 1.14e4
82.20
  • 82.20
  • 66.11
  • 50.70
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0010153rumen papilla
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
4.89e3
  • 4.89e3
  • 4.91e3
78.83
  • 78.83
  • 78.71
AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000104life cycle
5.24e3
  • 5.24e3
77.28
  • 77.28
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0000104life cycle
5.67e3
  • 5.67e3
75.45
  • 75.45
AEIR
  • AEIR
UBERON:0001826nasal cavity mucosa
  • UBERON:0000104life cycle
6.21e3
  • 6.21e3
73.09
  • 73.09
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
6.67e3
  • 6.67e3
71.10
  • 71.10
AEIR
  • AEIR
UBERON:0004703dorsal thalamus
  • UBERON:0018241prime adult stage
7.31e3
  • 7.31e3
68.34
  • 68.34
AEIR
  • AEIR
UBERON:0001477infraspinatus muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
7.70e3
  • 7.70e3
  • 7.71e3
66.61
  • 66.61
  • 66.59
AEIR
  • AEIR
  • AEIR
UBERON:0001000vas deferens
  • UBERON:0018241prime adult stage
7.79e3
  • 7.79e3
66.23
  • 66.23
AEIR
  • AEIR
UBERON:0000051fornix of vagina
  • UBERON:0000104life cycle
7.81e3
  • 7.81e3
66.14
  • 66.14
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
8.03e3
  • 8.03e3
  • 1.25e4
65.21
  • 65.21
  • 45.87
AEIR
  • AEIR
  • AEIR
UBERON:0004180mammary gland fat
  • UBERON:0018241prime adult stage
9.93e3
  • 9.93e3
56.98
  • 56.98
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.00e4
  • 1.00e4
  • 1.68e4
  • 1.70e4
56.55
  • 56.55
  • 27.08
  • 26.46
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000104life cycle
1.01e4
  • 1.01e4
56.30
  • 56.30
AEIR
  • AEIR
CL:0000503theca cell
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
54.66
  • 54.66
AEIR
  • AEIR
UBERON:0002081cardiac atrium
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.12e4
  • 1.12e4
  • 1.12e4
51.46
  • 51.46
  • 51.34
AEIR
  • AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
48.75
  • 48.75
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0018241prime adult stage
1.21e4
  • 1.21e4
47.43
  • 47.43
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
1.22e4
  • 1.22e4
46.99
  • 46.99
AEIR
  • AEIR
UBERON:0001103diaphragm
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
45.40
  • 45.40
AEIR
  • AEIR
UBERON:0002512corpus luteum
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
45.33
  • 45.33
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.27e4
  • 1.27e4
  • 1.74e4
44.84
  • 44.84
  • 24.78
AEIR
  • AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0018241prime adult stage
1.28e4
  • 1.28e4
44.62
  • 44.62
AEIR
  • AEIR
UBERON:0007361ruminant reticulum
  • UBERON:0018241prime adult stage
1.33e4
  • 1.33e4
42.32
  • 42.32
AEIR
  • AEIR
UBERON:0001739laryngeal cartilage
  • UBERON:0000104life cycle
1.36e4
  • 1.36e4
41.13
  • 41.13
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.37e4
  • 1.37e4
  • 1.40e4
  • 1.56e4
  • 1.89e4
40.61
  • 40.61
  • 39.27
  • 32.52
  • 18.10
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002110gall bladder
  • UBERON:0000104life cycle
1.39e4
  • 1.39e4
39.69
  • 39.69
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.40e4
  • 1.40e4
  • 1.55e4
39.14
  • 39.14
  • 33.04
AEIR
  • AEIR
  • AEIR
UBERON:0007625pigment epithelium of eye
  • UBERON:0000104life cycle
1.43e4
  • 1.43e4
37.97
  • 37.97
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.45e4
  • 1.45e4
37.32
  • 37.32
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
1.47e4
  • 1.47e4
36.17
  • 36.17
AEIR
  • AEIR
UBERON:0000057urethra
  • UBERON:0000104life cycle
1.52e4
  • 1.52e4
34.23
  • 34.23
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.52e4
  • 1.52e4
  • 1.56e4
34.17
  • 34.17
  • 32.22
AEIR
  • AEIR
  • AEIR
UBERON:0012648ampulla of uterine tube
  • UBERON:0000104life cycle
1.55e4
  • 1.55e4
32.60
  • 32.60
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0018241prime adult stage
1.64e4
  • 1.64e4
29.05
  • 29.05
AEIR
  • AEIR
UBERON:0005386olfactory segment of nasal mucosa
  • UBERON:0000104life cycle
1.72e4
  • 1.72e4
25.54
  • 25.54
AEIR
  • AEIR
UBERON:0016632isthmus of fallopian tube
  • UBERON:0000104life cycle
1.73e4
  • 1.73e4
24.99
  • 24.99
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.75e4
  • 1.75e4
  • 1.95e4
23.97
  • 23.97
  • 15.40
AEIR
  • AEIR
  • AEIR
CL:0000775neutrophil
  • UBERON:0018241prime adult stage
1.77e4
  • 1.77e4
23.32
  • 23.32
AEIR
  • AEIR
UBERON:0001913milk
  • UBERON:0000113post-juvenile adult stage
1.82e4
  • 1.82e4
21.11
  • 21.11
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Amniota14 species14 genesCompare expression

Orthology information comes from OMA : ENSBTAG00000030814.

Cross-references

EnsemblENSBTAG00000030814 (TFF2)
HGNCHGNC:11756 (TFF2)
EMBLBC114896, DAAA02003293
Uniprot/SPTREMBLA4FUH6, A4FUH6_BOVIN

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