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B. taurus Gene: SLC17A4 - ENSBTAG00000037738 - Bos taurus (cattle)

General information

Ensembl IDENSBTAG00000037738
NameSLC17A4
Descriptionsolute carrier family 17, member 4 [Source:HGNC Symbol;Acc:HGNC:10932]
OrganismBos taurus (cattle)
Synonym(s)kiaa2138
Orthologs(s)13 orthologs
Paralog(s)34 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.29e3
  • 1.29e3
  • 1.42e3
  • 2.29e3
94.43
  • 94.43
  • 93.84
  • 90.09
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
8.43e3
  • 8.43e3
  • 2.05e4
63.46
  • 63.46
  • 11.03
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.21e4
  • 1.21e4
47.77
  • 47.77
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.24e4
  • 1.24e4
46.47
  • 46.47
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.27e4
  • 1.27e4
44.90
  • 44.90
AEIR
  • AEIR
CL:0000711cumulus cell
  • UBERON:0000104life cycle
1.27e4
  • 1.27e4
44.89
  • 44.89
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.39e4
  • 1.39e4
39.95
  • 39.95
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.43e4
  • 1.43e4
38.11
  • 38.11
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0000104life cycle
1.67e4
  • 1.67e4
27.76
  • 27.76
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000104life cycle
1.67e4
  • 1.67e4
27.52
  • 27.52
AEIR
  • AEIR
UBERON:0001375semitendinosus
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.84e4
  • 1.84e4
  • 2.05e4
20.39
  • 20.39
  • 11.22
AEIR
  • AEIR
  • AEIR
UBERON:0001913milk
  • UBERON:0000113post-juvenile adult stage
1.90e4
  • 1.90e4
17.58
  • 17.58
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression

Orthology information comes from OMA : ENSBTAG00000037738.

Paralogs (same species)

Cross-references

EnsemblENSBTAG00000037738 (SLC17A4)
HGNCHGNC:10932 (SLC17A4)
EMBLDAAA02055504
Uniprot/SPTREMBLE1BDD2, E1BDD2_BOVIN, G3MYT8, G3MYT8_BOVIN

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