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B. taurus Gene: C10orf53 - ENSBTAG00000045949 - Bos taurus (cattle)

General information

Ensembl IDENSBTAG00000045949
NameC10orf53
Descriptionchromosome 10 open reading frame 53 [Source:HGNC Symbol;Acc:HGNC:27421]
OrganismBos taurus (cattle)
Synonym(s)em:ac069546.1, upf0728
Orthologs(s)12 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.55e3
  • 1.55e3
  • 1.61e3
  • 1.27e4
  • 1.37e4
93.30
  • 93.30
  • 93.01
  • 44.92
  • 40.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004358caput epididymis
  • UBERON:0018241prime adult stage
6.86e3
  • 6.86e3
70.29
  • 70.29
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
6.96e3
  • 6.96e3
69.84
  • 69.84
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
54.59
  • 54.59
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
  • 2.10e4
42.78
  • 42.78
  • 8.77
AEIR
  • AEIR
  • AEIR
UBERON:0004703dorsal thalamus
  • UBERON:0018241prime adult stage
1.35e4
  • 1.35e4
41.39
  • 41.39
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.39e4
  • 1.39e4
  • 1.79e4
39.96
  • 39.96
  • 22.24
AEIR
  • AEIR
  • AEIR
CL:0000711cumulus cell
  • UBERON:0000104life cycle
1.68e4
  • 1.68e4
27.16
  • 27.16
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.79e4
  • 1.79e4
  • 2.08e4
22.33
  • 22.33
  • 9.67
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria9 species9 genesCompare expression
Mammalia10 species10 genesCompare expression
Tetrapoda11 species11 genesCompare expression
Euteleostomi12 species12 genesCompare expression

Orthology information comes from OMA : ENSBTAG00000045949.

Cross-references

EnsemblENSBTAG00000045949 (C10orf53)
HGNCHGNC:27421 (C10orf53)
EMBLEH124702
Uniprot/SWISSPROTCJ053_BOVIN, P0C920

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