B. taurus Gene: POPDC3 - ENSBTAG00000046017 - Bos taurus (cattle)

General information

Ensembl IDENSBTAG00000046017
NamePOPDC3
Descriptionpopeye domain containing 3 [Source:HGNC Symbol;Acc:HGNC:17649]
OrganismBos taurus (cattle)
Synonym(s)ba355m14.1, mgc22671, pop3
Orthologs(s)17 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001375semitendinosus
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.14e3
  • 1.14e3
  • 1.72e3
  • 9.94e3
95.08
  • 95.08
  • 92.54
  • 56.90
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002081cardiac atrium
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.54e3
  • 1.54e3
  • 1.56e3
93.32
  • 93.32
  • 93.25
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.55e3
  • 1.55e3
  • 1.90e3
  • 2.44e3
93.27
  • 93.27
  • 91.79
  • 89.44
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001381semimembranosus muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.56e3
  • 1.56e3
  • 2.53e3
93.25
  • 93.25
  • 89.04
AEIR
  • AEIR
  • AEIR
UBERON:0001509triceps brachii
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.59e3
  • 1.59e3
  • 1.59e3
93.13
  • 93.13
  • 93.11
AEIR
  • AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.64e3
  • 1.64e3
  • 1.70e3
92.88
  • 92.88
  • 92.61
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.86e3
  • 1.86e3
  • 9.33e3
91.93
  • 91.93
  • 59.56
AEIR
  • AEIR
  • AEIR
UBERON:0001477infraspinatus muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.99e3
  • 1.99e3
  • 2.00e3
91.40
  • 91.40
  • 91.34
AEIR
  • AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000104life cycle
2.13e3
  • 2.13e3
90.78
  • 90.78
AEIR
  • AEIR
UBERON:0001374biceps femoris
  • UBERON:0000104life cycle
2.25e3
  • 2.25e3
90.26
  • 90.26
AEIR
  • AEIR
UBERON:0002512corpus luteum
  • UBERON:0000104life cycle
2.27e3
  • 2.27e3
90.18
  • 90.18
AEIR
  • AEIR
UBERON:0001378rectus femoris
  • UBERON:0000104life cycle
2.38e3
  • 2.38e3
89.70
  • 89.70
AEIR
  • AEIR
UBERON:0000378tongue muscle
  • UBERON:0000104life cycle
2.39e3
  • 2.39e3
89.65
  • 89.65
AEIR
  • AEIR
UBERON:0003984uterine tube infundibulum
  • UBERON:0000104life cycle
2.41e3
  • 2.41e3
89.54
  • 89.54
AEIR
  • AEIR
UBERON:0002383supraspinatus muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.44e3
  • 2.44e3
  • 2.45e3
89.41
  • 89.41
  • 89.38
AEIR
  • AEIR
  • AEIR
UBERON:0001886choroid plexus
  • UBERON:0018241prime adult stage
2.60e3
  • 2.60e3
88.75
  • 88.75
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0000104life cycle
2.78e3
  • 2.78e3
87.96
  • 87.96
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0000104life cycle
3.06e3
  • 3.06e3
86.75
  • 86.75
AEIR
  • AEIR
UBERON:0001826nasal cavity mucosa
  • UBERON:0000104life cycle
4.72e3
  • 4.72e3
79.55
  • 79.55
AEIR
  • AEIR
UBERON:0001739laryngeal cartilage
  • UBERON:0000104life cycle
5.10e3
  • 5.10e3
77.91
  • 77.91
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0018241prime adult stage
6.04e3
  • 6.04e3
73.82
  • 73.82
AEIR
  • AEIR
CL:0000711cumulus cell
  • UBERON:0000104life cycle
6.14e3
  • 6.14e3
73.37
  • 73.37
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
6.34e3
  • 6.34e3
72.55
  • 72.55
AEIR
  • AEIR
UBERON:0001111intercostal muscle
  • UBERON:0000104life cycle
6.38e3
  • 6.38e3
72.33
  • 72.33
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0018241prime adult stage
6.59e3
  • 6.59e3
71.43
  • 71.43
AEIR
  • AEIR
UBERON:0002367prostate gland
  • UBERON:0018241prime adult stage
6.76e3
  • 6.76e3
70.73
  • 70.73
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0000104life cycle
7.09e3
  • 7.09e3
69.26
  • 69.26
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
7.15e3
  • 7.15e3
69.02
  • 69.02
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
7.23e3
  • 7.23e3
  • 1.35e4
68.68
  • 68.68
  • 41.49
AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
7.25e3
  • 7.25e3
68.58
  • 68.58
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000104life cycle
7.46e3
  • 7.46e3
67.69
  • 67.69
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
7.72e3
  • 7.72e3
66.56
  • 66.56
AEIR
  • AEIR
UBERON:0001296myometrium
  • UBERON:0000104life cycle
7.75e3
  • 7.75e3
66.42
  • 66.42
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
8.02e3
  • 8.02e3
  • 8.32e3
  • 1.06e4
  • 1.16e4
65.25
  • 65.25
  • 63.95
  • 54.07
  • 49.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
8.55e3
  • 8.55e3
  • 1.02e4
  • 1.37e4
  • 1.49e4
62.96
  • 62.96
  • 55.79
  • 40.61
  • 35.40
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • UBERON:0000104life cycle
8.84e3
  • 8.84e3
61.68
  • 61.68
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
9.41e3
  • 9.41e3
  • 1.42e4
59.21
  • 59.21
  • 38.53
AEIR
  • AEIR
  • AEIR
UBERON:0007367surface of tongue
  • UBERON:0000104life cycle
9.50e3
  • 9.50e3
58.83
  • 58.83
AEIR
  • AEIR
UBERON:0004180mammary gland fat
  • UBERON:0018241prime adult stage
9.65e3
  • 9.65e3
58.17
  • 58.17
AEIR
  • AEIR
UBERON:0016632isthmus of fallopian tube
  • UBERON:0000104life cycle
9.69e3
  • 9.69e3
58.00
  • 58.00
AEIR
  • AEIR
UBERON:0012648ampulla of uterine tube
  • UBERON:0000104life cycle
9.75e3
  • 9.75e3
57.73
  • 57.73
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0000104life cycle
9.93e3
  • 9.93e3
56.98
  • 56.98
AEIR
  • AEIR
UBERON:0000051fornix of vagina
  • UBERON:0000104life cycle
1.00e4
  • 1.00e4
56.52
  • 56.52
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.01e4
  • 1.01e4
  • 1.04e4
56.31
  • 56.31
  • 55.14
AEIR
  • AEIR
  • AEIR
UBERON:0007625pigment epithelium of eye
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
55.30
  • 55.30
AEIR
  • AEIR
UBERON:0003126trachea
  • UBERON:0000104life cycle
1.04e4
  • 1.04e4
54.87
  • 54.87
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
53.50
  • 53.50
AEIR
  • AEIR
UBERON:0002247uterine horn
  • UBERON:0018241prime adult stage
1.09e4
  • 1.09e4
52.71
  • 52.71
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
52.41
  • 52.41
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.11e4
  • 1.11e4
52.00
  • 52.00
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000068embryo stage
1.12e4
  • 1.12e4
51.66
  • 51.66
AEIR
  • AEIR
UBERON:0001158descending colon
  • UBERON:0000104life cycle
1.14e4
  • 1.14e4
50.69
  • 50.69
AEIR
  • AEIR
UBERON:0000002uterine cervix
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.14e4
  • 1.14e4
  • 1.14e4
50.59
  • 50.59
  • 50.52
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
  • 1.47e4
48.75
  • 48.75
  • 36.40
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.19e4
  • 1.19e4
48.44
  • 48.44
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018241prime adult stage
1.22e4
  • 1.22e4
46.94
  • 46.94
AEIR
  • AEIR
UBERON:0002198neurohypophysis
  • UBERON:0000104life cycle
1.23e4
  • 1.23e4
46.87
  • 46.87
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.24e4
  • 1.24e4
46.08
  • 46.08
AEIR
  • AEIR
UBERON:0007361ruminant reticulum
  • UBERON:0018241prime adult stage
1.27e4
  • 1.27e4
45.04
  • 45.04
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.27e4
  • 1.27e4
45.03
  • 45.03
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.28e4
  • 1.28e4
  • 1.42e4
44.73
  • 44.73
  • 38.67
AEIR
  • AEIR
  • AEIR
CL:0000775neutrophil
  • UBERON:0018241prime adult stage
1.28e4
  • 1.28e4
44.59
  • 44.59
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.29e4
  • 1.29e4
44.01
  • 44.01
AEIR
  • AEIR
UBERON:0001156ascending colon
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.29e4
  • 1.29e4
  • 1.29e4
43.95
  • 43.95
  • 43.92
AEIR
  • AEIR
  • AEIR
UBERON:0002196adenohypophysis
  • UBERON:0000104life cycle
1.29e4
  • 1.29e4
43.88
  • 43.88
AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.31e4
  • 1.31e4
  • 1.42e4
  • 1.48e4
43.36
  • 43.36
  • 38.27
  • 35.90
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.33e4
  • 1.33e4
42.27
  • 42.27
AEIR
  • AEIR
UBERON:0001913milk
  • UBERON:0000113post-juvenile adult stage
1.34e4
  • 1.34e4
41.79
  • 41.79
AEIR
  • AEIR
UBERON:0002110gall bladder
  • UBERON:0000104life cycle
1.35e4
  • 1.35e4
41.70
  • 41.70
AEIR
  • AEIR
CL:0000503theca cell
  • UBERON:0018241prime adult stage
1.35e4
  • 1.35e4
41.62
  • 41.62
AEIR
  • AEIR
UBERON:0007362omasum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.36e4
  • 1.36e4
  • 1.38e4
41.02
  • 41.02
  • 40.34
AEIR
  • AEIR
  • AEIR
UBERON:0000056ureter
  • UBERON:0000104life cycle
1.36e4
  • 1.36e4
40.88
  • 40.88
AEIR
  • AEIR
UBERON:0000057urethra
  • UBERON:0000104life cycle
1.37e4
  • 1.37e4
40.57
  • 40.57
AEIR
  • AEIR
UBERON:0005386olfactory segment of nasal mucosa
  • UBERON:0000104life cycle
1.38e4
  • 1.38e4
40.09
  • 40.09
AEIR
  • AEIR
UBERON:0004358caput epididymis
  • UBERON:0018241prime adult stage
1.41e4
  • 1.41e4
39.08
  • 39.08
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
38.72
  • 38.72
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.43e4
  • 1.43e4
38.06
  • 38.06
AEIR
  • AEIR
UBERON:0003309floor plate of diencephalon
  • UBERON:0018241prime adult stage
1.44e4
  • 1.44e4
37.72
  • 37.72
AEIR
  • AEIR
UBERON:0016538temporal cortex
  • UBERON:0000104life cycle
1.44e4
  • 1.44e4
37.66
  • 37.66
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
1.46e4
  • 1.46e4
36.79
  • 36.79
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.49e4
  • 1.49e4
  • 1.66e4
35.21
  • 35.21
  • 27.98
AEIR
  • AEIR
  • AEIR
UBERON:0007365rumen
  • UBERON:0000112sexually immature stage
1.84e4
  • 1.84e4
20.25
  • 20.25
AEIR
  • AEIR
UBERON:0008285rumen epithelium
  • UBERON:0018241prime adult stage
1.92e4
  • 1.92e4
16.69
  • 16.69
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSBTAG00000046017.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSBTAG00000046017.

Cross-references

EnsemblENSBTAG00000046017 (POPDC3)
HGNCHGNC:17649 (POPDC3)
EMBLDAAA02026044
Uniprot/SPTREMBLG3N3W7, G3N3W7_BOVIN

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