B. taurus Gene: CCDC177 - ENSBTAG00000047101 - Bos taurus (cattle)

General information

Ensembl IDENSBTAG00000047101
NameCCDC177
Descriptioncoiled-coil domain containing 177 [Source:HGNC Symbol;Acc:HGNC:23243]
OrganismBos taurus (cattle)
Synonym(s)c14orf162, plpl
Orthologs(s)12 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • UBERON:0000104life cycle
8.43e3
  • 8.43e3
63.47
  • 63.47
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
1.31e4
  • 1.31e4
43.30
  • 43.30
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.40e4
  • 1.40e4
  • 1.40e4
39.47
  • 39.47
  • 39.14
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.41e4
  • 1.41e4
39.04
  • 39.04
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0018241prime adult stage
1.44e4
  • 1.44e4
37.65
  • 37.65
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000068embryo stage
1.45e4
  • 1.45e4
37.34
  • 37.34
AEIR
  • AEIR
UBERON:0016538temporal cortex
  • UBERON:0000104life cycle
1.47e4
  • 1.47e4
36.49
  • 36.49
AEIR
  • AEIR
UBERON:0003309floor plate of diencephalon
  • UBERON:0018241prime adult stage
1.52e4
  • 1.52e4
34.28
  • 34.28
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
1.81e4
  • 1.81e4
21.73
  • 21.73
AEIR
  • AEIR
UBERON:0001913milk
  • UBERON:0000113post-juvenile adult stage
1.90e4
  • 1.90e4
17.80
  • 17.80
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria2 species2 genesCompare expression
Boreoeutheria8 species8 genesCompare expression
Amniota10 species10 genesCompare expression
Tetrapoda11 species11 genesCompare expression
Euteleostomi12 species12 genesCompare expression

Orthology information comes from OMA : ENSBTAG00000047101.

Cross-references

EnsemblENSBTAG00000047101 (CCDC177)
HGNCHGNC:23243 (CCDC177)
EMBLDAAA02029509
Uniprot/SPTREMBLG3MZ37, G3MZ37_BOVIN

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