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B. taurus Gene: CCDC188 - ENSBTAG00000047626 - Bos taurus (cattle)

General information

Ensembl IDENSBTAG00000047626
NameCCDC188
Descriptioncoiled-coil domain containing 188 [Source:HGNC Symbol;Acc:HGNC:51899]
OrganismBos taurus (cattle)
Orthologs(s)5 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.78e3
  • 1.78e3
  • 5.91e3
  • 1.37e4
92.31
  • 92.31
  • 74.39
  • 40.61
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
5.35e3
  • 5.35e3
76.84
  • 76.84
AEIR
  • AEIR
UBERON:0001739laryngeal cartilage
  • UBERON:0000104life cycle
6.65e3
  • 6.65e3
71.17
  • 71.17
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
6.93e3
  • 6.93e3
  • 6.99e3
  • 8.18e3
  • 1.04e4
69.95
  • 69.95
  • 69.72
  • 64.56
  • 54.94
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002512corpus luteum
  • UBERON:0000104life cycle
6.99e3
  • 6.99e3
69.71
  • 69.71
AEIR
  • AEIR
UBERON:0000002uterine cervix
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
7.35e3
  • 7.35e3
  • 7.38e3
68.13
  • 68.13
  • 68.02
AEIR
  • AEIR
  • AEIR
UBERON:0016632isthmus of fallopian tube
  • UBERON:0000104life cycle
7.70e3
  • 7.70e3
66.62
  • 66.62
AEIR
  • AEIR
UBERON:0002081cardiac atrium
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
7.85e3
  • 7.85e3
  • 7.96e3
66.00
  • 66.00
  • 65.50
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
7.97e3
  • 7.97e3
  • 1.22e4
65.48
  • 65.48
  • 47.23
AEIR
  • AEIR
  • AEIR
UBERON:0000056ureter
  • UBERON:0000104life cycle
8.15e3
  • 8.15e3
64.66
  • 64.66
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0000104life cycle
8.23e3
  • 8.23e3
64.34
  • 64.34
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
8.36e3
  • 8.36e3
63.78
  • 63.78
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
8.42e3
  • 8.42e3
63.50
  • 63.50
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
8.55e3
  • 8.55e3
  • 1.38e4
62.95
  • 62.95
  • 40.31
AEIR
  • AEIR
  • AEIR
UBERON:0002000gluteal muscle
  • UBERON:0000104life cycle
8.75e3
  • 8.75e3
62.08
  • 62.08
AEIR
  • AEIR
UBERON:0001381semimembranosus muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
8.76e3
  • 8.76e3
  • 1.00e4
62.03
  • 62.03
  • 56.50
AEIR
  • AEIR
  • AEIR
UBERON:0001477infraspinatus muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
8.82e3
  • 8.82e3
  • 8.84e3
61.79
  • 61.79
  • 61.68
AEIR
  • AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0000104life cycle
8.94e3
  • 8.94e3
61.26
  • 61.26
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
9.14e3
  • 9.14e3
  • 1.10e4
60.40
  • 60.40
  • 52.50
AEIR
  • AEIR
  • AEIR
UBERON:0002247uterine horn
  • UBERON:0018241prime adult stage
9.25e3
  • 9.25e3
59.91
  • 59.91
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
9.45e3
  • 9.45e3
59.07
  • 59.07
AEIR
  • AEIR
UBERON:0003984uterine tube infundibulum
  • UBERON:0000104life cycle
9.48e3
  • 9.48e3
58.90
  • 58.90
AEIR
  • AEIR
UBERON:0001374biceps femoris
  • UBERON:0000104life cycle
9.73e3
  • 9.73e3
57.84
  • 57.84
AEIR
  • AEIR
UBERON:0004180mammary gland fat
  • UBERON:0018241prime adult stage
9.77e3
  • 9.77e3
57.68
  • 57.68
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000104life cycle
9.85e3
  • 9.85e3
57.33
  • 57.33
AEIR
  • AEIR
CL:0000503theca cell
  • UBERON:0018241prime adult stage
1.01e4
  • 1.01e4
56.32
  • 56.32
AEIR
  • AEIR
UBERON:0000378tongue muscle
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
55.17
  • 55.17
AEIR
  • AEIR
UBERON:0003309floor plate of diencephalon
  • UBERON:0018241prime adult stage
1.04e4
  • 1.04e4
55.09
  • 55.09
AEIR
  • AEIR
UBERON:0002198neurohypophysis
  • UBERON:0000104life cycle
1.04e4
  • 1.04e4
54.95
  • 54.95
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000068embryo stage
1.05e4
  • 1.05e4
54.66
  • 54.66
AEIR
  • AEIR
UBERON:0000057urethra
  • UBERON:0000104life cycle
1.05e4
  • 1.05e4
54.41
  • 54.41
AEIR
  • AEIR
UBERON:0000051fornix of vagina
  • UBERON:0000104life cycle
1.06e4
  • 1.06e4
54.16
  • 54.16
AEIR
  • AEIR
UBERON:0001296myometrium
  • UBERON:0000104life cycle
1.06e4
  • 1.06e4
53.93
  • 53.93
AEIR
  • AEIR
UBERON:0004703dorsal thalamus
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
53.82
  • 53.82
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
  • 1.48e4
53.71
  • 53.71
  • 35.88
AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.07e4
  • 1.07e4
53.67
  • 53.67
AEIR
  • AEIR
UBERON:0007625pigment epithelium of eye
  • UBERON:0000104life cycle
1.08e4
  • 1.08e4
53.37
  • 53.37
AEIR
  • AEIR
UBERON:0001371gluteus medius
  • UBERON:0000104life cycle
1.08e4
  • 1.08e4
53.01
  • 53.01
AEIR
  • AEIR
UBERON:0002196adenohypophysis
  • UBERON:0000104life cycle
1.09e4
  • 1.09e4
52.56
  • 52.56
AEIR
  • AEIR
UBERON:0000947aorta
  • UBERON:0000104life cycle
1.09e4
  • 1.09e4
52.55
  • 52.55
AEIR
  • AEIR
UBERON:0012648ampulla of uterine tube
  • UBERON:0000104life cycle
1.12e4
  • 1.12e4
51.45
  • 51.45
AEIR
  • AEIR
UBERON:0001103diaphragm
  • UBERON:0000104life cycle
1.12e4
  • 1.12e4
51.40
  • 51.40
AEIR
  • AEIR
UBERON:0001378rectus femoris
  • UBERON:0000104life cycle
1.12e4
  • 1.12e4
51.29
  • 51.29
AEIR
  • AEIR
UBERON:0003126trachea
  • UBERON:0000104life cycle
1.14e4
  • 1.14e4
50.71
  • 50.71
AEIR
  • AEIR
UBERON:0001375semitendinosus
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.14e4
  • 1.14e4
  • 1.22e4
  • 1.33e4
50.45
  • 50.45
  • 47.12
  • 42.53
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002110gall bladder
  • UBERON:0000104life cycle
1.14e4
  • 1.14e4
50.43
  • 50.43
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.14e4
  • 1.14e4
50.39
  • 50.39
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.15e4
  • 1.15e4
  • 1.94e4
50.22
  • 50.22
  • 16.07
AEIR
  • AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
50.13
  • 50.13
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
50.08
  • 50.08
AEIR
  • AEIR
UBERON:0005386olfactory segment of nasal mucosa
  • UBERON:0000104life cycle
1.17e4
  • 1.17e4
49.48
  • 49.48
AEIR
  • AEIR
UBERON:0004358caput epididymis
  • UBERON:0018241prime adult stage
1.17e4
  • 1.17e4
49.33
  • 49.33
AEIR
  • AEIR
UBERON:0001111intercostal muscle
  • UBERON:0000104life cycle
1.19e4
  • 1.19e4
48.36
  • 48.36
AEIR
  • AEIR
UBERON:0001158descending colon
  • UBERON:0000104life cycle
1.19e4
  • 1.19e4
48.33
  • 48.33
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0000104life cycle
1.19e4
  • 1.19e4
48.29
  • 48.29
AEIR
  • AEIR
UBERON:0007362omasum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.20e4
  • 1.20e4
  • 1.23e4
48.13
  • 48.13
  • 46.53
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.21e4
  • 1.21e4
47.49
  • 47.49
AEIR
  • AEIR
UBERON:0001156ascending colon
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.24e4
  • 1.24e4
  • 1.24e4
46.40
  • 46.40
  • 46.28
AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
  • 1.36e4
46.38
  • 46.38
  • 41.11
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.25e4
  • 1.25e4
45.77
  • 45.77
AEIR
  • AEIR
UBERON:0002383supraspinatus muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.25e4
  • 1.25e4
  • 1.26e4
45.67
  • 45.67
  • 45.60
AEIR
  • AEIR
  • AEIR
UBERON:0007361ruminant reticulum
  • UBERON:0018241prime adult stage
1.26e4
  • 1.26e4
45.47
  • 45.47
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.27e4
  • 1.27e4
  • 1.31e4
45.17
  • 45.17
  • 43.23
AEIR
  • AEIR
  • AEIR
UBERON:0007367surface of tongue
  • UBERON:0000104life cycle
1.28e4
  • 1.28e4
44.35
  • 44.35
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0018241prime adult stage
1.31e4
  • 1.31e4
43.27
  • 43.27
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.31e4
  • 1.31e4
  • 1.44e4
43.17
  • 43.17
  • 37.72
AEIR
  • AEIR
  • AEIR
UBERON:0001000vas deferens
  • UBERON:0018241prime adult stage
1.31e4
  • 1.31e4
43.11
  • 43.11
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
42.99
  • 42.99
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
42.77
  • 42.77
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.33e4
  • 1.33e4
42.44
  • 42.44
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.35e4
  • 1.35e4
41.38
  • 41.38
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0018241prime adult stage
1.36e4
  • 1.36e4
40.84
  • 40.84
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.38e4
  • 1.38e4
  • 1.49e4
40.16
  • 40.16
  • 35.34
AEIR
  • AEIR
  • AEIR
UBERON:0002507abdominal lymph node
  • UBERON:0018241prime adult stage
1.39e4
  • 1.39e4
39.61
  • 39.61
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
1.40e4
  • 1.40e4
39.19
  • 39.19
AEIR
  • AEIR
UBERON:0007365rumen
  • UBERON:0000112sexually immature stage
1.43e4
  • 1.43e4
38.08
  • 38.08
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0018241prime adult stage
1.43e4
  • 1.43e4
38.03
  • 38.03
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
1.48e4
  • 1.48e4
35.91
  • 35.91
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0018241prime adult stage
1.49e4
  • 1.49e4
35.32
  • 35.32
AEIR
  • AEIR
UBERON:0008285rumen epithelium
  • UBERON:0018241prime adult stage
1.53e4
  • 1.53e4
33.71
  • 33.71
AEIR
  • AEIR
CL:0000738leukocyte
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.58e4
  • 1.58e4
  • 1.66e4
31.44
  • 31.44
  • 27.99
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.61e4
  • 1.61e4
  • 1.62e4
  • 1.72e4
30.40
  • 30.40
  • 29.91
  • 25.47
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001913milk
  • UBERON:0000113post-juvenile adult stage
1.78e4
  • 1.78e4
22.70
  • 22.70
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0018241prime adult stage
1.80e4
  • 1.80e4
22.06
  • 22.06
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSBTAG00000047626 (CCDC188)
HGNCHGNC:51899 (CCDC188)
EMBLDAAA02045814, DAAA02045815
Uniprot/SPTREMBLG3N3B6, G3N3B6_BOVIN

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