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C. lupus familiaris Gene: SLC18B1 - ENSCAFG00000000189 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000000189
NameSLC18B1
Descriptionsolute carrier family 18, subfamily B, member 1 [Source:HGNC Symbol;Acc:HGNC:21573]
OrganismCanis lupus familiaris (dog)
Synonym(s)c6orf192, dj55c23.6
Orthologs(s)18 orthologs
Paralog(s)28 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
2.57e3
  • 2.57e3
88.51
  • 88.51
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
2.78e3
  • 2.78e3
87.56
  • 87.56
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
2.96e3
  • 2.96e3
  • 5.07e3
86.75
  • 86.75
  • 77.33
AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
3.14e3
  • 3.14e3
  • 5.56e3
85.98
  • 85.98
  • 75.13
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
3.27e3
  • 3.27e3
85.38
  • 85.38
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.54e3
  • 3.54e3
  • 8.76e3
  • 1.03e4
84.19
  • 84.19
  • 60.83
  • 54.14
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
3.68e3
  • 3.68e3
83.56
  • 83.56
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
3.78e3
  • 3.78e3
  • 4.73e3
83.10
  • 83.10
  • 78.85
AEIR
  • AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
3.92e3
  • 3.92e3
82.49
  • 82.49
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
3.98e3
  • 3.98e3
82.19
  • 82.19
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
4.05e3
  • 4.05e3
81.88
  • 81.88
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
4.14e3
  • 4.14e3
  • 5.06e3
  • 7.80e3
81.47
  • 81.47
  • 77.37
  • 65.12
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
4.39e3
  • 4.39e3
  • 4.78e3
80.39
  • 80.39
  • 78.61
AEIR
  • AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
4.59e3
  • 4.59e3
79.48
  • 79.48
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
4.61e3
  • 4.61e3
  • 8.59e3
79.40
  • 79.40
  • 61.59
AEIR
  • AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000113post-juvenile adult stage
4.61e3
  • 4.61e3
79.38
  • 79.38
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
4.62e3
  • 4.62e3
79.34
  • 79.34
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
4.70e3
  • 4.70e3
79.00
  • 79.00
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
4.72e3
  • 4.72e3
  • 8.92e3
78.90
  • 78.90
  • 60.10
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
4.77e3
  • 4.77e3
  • 5.96e3
78.67
  • 78.67
  • 73.36
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
4.91e3
  • 4.91e3
78.04
  • 78.04
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
5.03e3
  • 5.03e3
  • 6.20e3
77.51
  • 77.51
  • 72.30
AEIR
  • AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
5.09e3
  • 5.09e3
77.24
  • 77.24
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
5.20e3
  • 5.20e3
  • 6.83e3
  • 7.04e3
76.77
  • 76.77
  • 69.47
  • 68.53
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
5.27e3
  • 5.27e3
76.43
  • 76.43
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
5.29e3
  • 5.29e3
  • 6.66e3
76.33
  • 76.33
  • 70.24
AEIR
  • AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
5.33e3
  • 5.33e3
76.19
  • 76.19
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
5.37e3
  • 5.37e3
  • 6.11e3
75.99
  • 75.99
  • 72.70
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
5.49e3
  • 5.49e3
75.48
  • 75.48
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
5.51e3
  • 5.51e3
75.39
  • 75.39
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
5.67e3
  • 5.67e3
74.63
  • 74.63
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
5.69e3
  • 5.69e3
74.58
  • 74.58
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
5.74e3
  • 5.74e3
74.36
  • 74.36
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
5.76e3
  • 5.76e3
74.27
  • 74.27
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
5.77e3
  • 5.77e3
  • 6.23e3
74.20
  • 74.20
  • 72.16
AEIR
  • AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
5.82e3
  • 5.82e3
73.98
  • 73.98
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
5.87e3
  • 5.87e3
73.76
  • 73.76
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
5.87e3
  • 5.87e3
  • 8.60e3
73.75
  • 73.75
  • 61.54
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.87e3
  • 5.87e3
  • 6.51e3
  • 6.77e3
  • 7.27e3
  • 8.30e3
73.74
  • 73.74
  • 70.89
  • 69.75
  • 67.51
  • 62.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
5.94e3
  • 5.94e3
73.43
  • 73.43
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
5.99e3
  • 5.99e3
73.20
  • 73.20
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
6.06e3
  • 6.06e3
  • 6.83e3
72.89
  • 72.89
  • 69.44
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
6.71e3
  • 6.71e3
  • 8.39e3
70.00
  • 70.00
  • 62.49
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
6.90e3
  • 6.90e3
  • 8.18e3
69.14
  • 69.14
  • 63.43
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
7.39e3
  • 7.39e3
66.96
  • 66.96
AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • UBERON:0000104life cycle
7.49e3
  • 7.49e3
66.49
  • 66.49
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
7.80e3
  • 7.80e3
65.10
  • 65.10
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
8.04e3
  • 8.04e3
64.03
  • 64.03
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
8.05e3
  • 8.05e3
64.01
  • 64.01
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
8.24e3
  • 8.24e3
63.16
  • 63.16
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
8.33e3
  • 8.33e3
62.75
  • 62.75
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
9.55e3
  • 9.55e3
57.31
  • 57.31
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
9.76e3
  • 9.76e3
56.37
  • 56.37
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.09e4
  • 1.09e4
51.32
  • 51.32
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.11e4
  • 1.11e4
50.50
  • 50.50
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000000189.

Paralogs (same species)

Cross-references

EnsemblENSCAFG00000000189 (SLC18B1)
HGNCHGNC:21573 (SLC18B1)
EMBLAAEX03000181
Uniprot/SPTREMBLE2R4P9, E2R4P9_CANLF, J9PA36, J9PA36_CANLF

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