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C. lupus familiaris Gene: PNLDC1 - ENSCAFG00000000740 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000000740
NamePNLDC1
DescriptionPARN like, ribonuclease domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21185]
OrganismCanis lupus familiaris (dog)
Synonym(s)dj195p10.2, flj40240
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000104life cycle
9.21e3
  • 9.21e3
58.80
  • 58.80
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.02e4
  • 1.02e4
54.48
  • 54.48
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.02e4
  • 1.02e4
  • 1.58e4
54.21
  • 54.21
  • 29.23
AEIR
  • AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.09e4
  • 1.09e4
51.37
  • 51.37
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.14e4
  • 1.14e4
  • 1.60e4
49.17
  • 49.17
  • 28.51
AEIR
  • AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
1.18e4
  • 1.18e4
47.22
  • 47.22
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.22e4
  • 1.22e4
45.44
  • 45.44
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.27e4
  • 1.27e4
43.25
  • 43.25
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.30e4
  • 1.30e4
41.99
  • 41.99
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.35e4
  • 1.35e4
  • 1.61e4
39.60
  • 39.60
  • 28.01
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.37e4
  • 1.37e4
38.88
  • 38.88
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
1.41e4
  • 1.41e4
37.09
  • 37.09
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.42e4
  • 1.42e4
36.61
  • 36.61
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
1.43e4
  • 1.43e4
36.17
  • 36.17
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
1.43e4
  • 1.43e4
35.90
  • 35.90
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.47e4
  • 1.47e4
  • 1.60e4
34.38
  • 34.38
  • 28.31
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
1.48e4
  • 1.48e4
33.68
  • 33.68
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.49e4
  • 1.49e4
  • 1.56e4
  • 1.56e4
  • 1.57e4
33.20
  • 33.20
  • 30.35
  • 30.05
  • 29.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.51e4
  • 1.51e4
  • 1.79e4
32.61
  • 32.61
  • 19.99
AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
1.51e4
  • 1.51e4
32.31
  • 32.31
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.52e4
  • 1.52e4
32.09
  • 32.09
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.52e4
  • 1.52e4
32.09
  • 32.09
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.52e4
  • 1.52e4
31.96
  • 31.96
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.52e4
  • 1.52e4
  • 1.56e4
31.86
  • 31.86
  • 30.34
AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.53e4
  • 1.53e4
31.51
  • 31.51
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.53e4
  • 1.53e4
  • 1.62e4
31.47
  • 31.47
  • 27.44
AEIR
  • AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.54e4
  • 1.54e4
31.09
  • 31.09
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.55e4
  • 1.55e4
  • 1.60e4
30.74
  • 30.74
  • 28.60
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.55e4
  • 1.55e4
  • 1.57e4
30.71
  • 30.71
  • 29.94
AEIR
  • AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000113post-juvenile adult stage
1.55e4
  • 1.55e4
30.71
  • 30.71
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.55e4
  • 1.55e4
  • 1.67e4
  • 2.00e4
30.63
  • 30.63
  • 25.39
  • 10.61
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0000113post-juvenile adult stage
1.56e4
  • 1.56e4
30.13
  • 30.13
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
1.56e4
  • 1.56e4
30.03
  • 30.03
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
1.57e4
  • 1.57e4
29.87
  • 29.87
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.58e4
  • 1.58e4
29.20
  • 29.20
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
1.58e4
  • 1.58e4
29.14
  • 29.14
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
1.60e4
  • 1.60e4
28.55
  • 28.55
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.60e4
  • 1.60e4
28.39
  • 28.39
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.67e4
  • 1.67e4
  • 1.68e4
25.20
  • 25.20
  • 24.93
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.68e4
  • 1.68e4
24.99
  • 24.99
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000000740.

Cross-references

EnsemblENSCAFG00000000740 (PNLDC1)
HGNCHGNC:21185 (PNLDC1)
EMBLAAEX03000318
Uniprot/SPTREMBLE2R0L8, E2R0L8_CANLF

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