C. lupus familiaris Gene: PAX4 - ENSCAFG00000001719 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000001719
NamePAX4
Descriptionpaired box 4 [Source:HGNC Symbol;Acc:HGNC:8618]
OrganismCanis lupus familiaris (dog)
Synonym(s)mody9
Orthologs(s)1 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001264pancreas
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.03e4
  • 1.03e4
  • 1.10e4
  • 1.29e4
53.75
  • 53.75
  • 50.71
  • 42.17
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
1.22e4
  • 1.22e4
  • 1.57e4
45.66
  • 45.66
  • 29.86
AEIR
  • AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000113post-juvenile adult stage
1.31e4
  • 1.31e4
41.34
  • 41.34
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.33e4
  • 1.33e4
40.39
  • 40.39
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
  • 2.12e4
37.00
  • 37.00
  • 5.27
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.44e4
  • 1.44e4
35.61
  • 35.61
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.56e4
  • 1.56e4
30.23
  • 30.23
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.70e4
  • 1.70e4
  • 2.14e4
23.99
  • 23.99
  • 4.27
AEIR
  • AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
1.88e4
  • 1.88e4
15.74
  • 15.74
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
2.01e4
  • 2.01e4
10.03
  • 10.03
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Amniota1 species1 geneCompare expression

Orthology information comes from OMA : ENSCAFG00000001719.

Cross-references

EnsemblENSCAFG00000001719 (PAX4)
HGNCHGNC:8618 (PAX4)
EMBLAAEX03009276
Uniprot/SPTREMBLE2REB7, E2REB7_CANLF, J9P4I3, J9P4I3_CANLF

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