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C. lupus familiaris Gene: CHMP5 - ENSCAFG00000001846 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000001846
NameCHMP5
Descriptioncharged multivesicular body protein 5 [Source:HGNC Symbol;Acc:HGNC:26942]
OrganismCanis lupus familiaris (dog)
Synonym(s)c9orf83, cgi-34, hspc177, snf7dc2, vps60
Orthologs(s)23 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
481
  • 481
  • 547
97.85
  • 97.85
  • 97.56
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
497
  • 497
  • 1.05e3
  • 1.23e3
97.78
  • 97.78
  • 95.31
  • 94.49
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
505
  • 505
97.75
  • 97.75
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
541
  • 541
  • 827
97.59
  • 97.59
  • 96.31
AEIR
  • AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
579
  • 579
97.42
  • 97.42
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
582
  • 582
  • 952
97.40
  • 97.40
  • 95.75
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
598
  • 598
97.33
  • 97.33
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
601
  • 601
97.32
  • 97.32
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
609
  • 609
97.28
  • 97.28
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
641
  • 641
97.14
  • 97.14
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
673
  • 673
96.99
  • 96.99
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
679
  • 679
96.97
  • 96.97
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
703
  • 703
96.86
  • 96.86
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
704
  • 704
96.86
  • 96.86
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
708
  • 708
96.84
  • 96.84
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
714
  • 714
96.81
  • 96.81
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
719
  • 719
  • 1.05e3
  • 1.16e3
96.79
  • 96.79
  • 95.33
  • 94.80
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
764
  • 764
96.59
  • 96.59
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
778
  • 778
96.53
  • 96.53
AEIR
  • AEIR
UBERON:0002079left cardiac atrium
  • UBERON:0007222late adult stage
782
  • 782
96.51
  • 96.51
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
789
  • 789
96.48
  • 96.48
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
790
  • 790
  • 927
96.47
  • 96.47
  • 95.86
AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
806
  • 806
96.40
  • 96.40
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
807
  • 807
96.39
  • 96.39
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
835
  • 835
  • 867
96.27
  • 96.27
  • 96.13
AEIR
  • AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
838
  • 838
96.26
  • 96.26
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
841
  • 841
  • 1.15e3
96.24
  • 96.24
  • 94.88
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
846
  • 846
  • 1.36e3
  • 2.19e3
96.22
  • 96.22
  • 93.92
  • 90.23
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
847
  • 847
  • 942
96.22
  • 96.22
  • 95.79
AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
850
  • 850
  • 1.68e3
96.20
  • 96.20
  • 92.48
AEIR
  • AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
855
  • 855
96.18
  • 96.18
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
858
  • 858
96.17
  • 96.17
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
863
  • 863
96.15
  • 96.15
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
883
  • 883
96.06
  • 96.06
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
889
  • 889
96.03
  • 96.03
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
890
  • 890
  • 1.87e3
96.03
  • 96.03
  • 91.63
AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
893
  • 893
  • 911
96.01
  • 96.01
  • 95.93
AEIR
  • AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
905
  • 905
95.96
  • 95.96
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
937
  • 937
  • 1.40e3
95.81
  • 95.81
  • 93.76
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
941
  • 941
95.80
  • 95.80
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
953
  • 953
  • 1.16e3
95.74
  • 95.74
  • 94.83
AEIR
  • AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.04e3
  • 1.04e3
  • 1.07e3
95.35
  • 95.35
  • 95.22
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.11e3
  • 1.11e3
95.03
  • 95.03
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.16e3
  • 1.16e3
94.82
  • 94.82
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.19e3
  • 1.19e3
  • 1.45e3
  • 1.68e3
  • 2.17e3
  • 2.20e3
94.70
  • 94.70
  • 93.50
  • 92.49
  • 90.28
  • 90.17
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.22e3
  • 1.22e3
  • 2.22e3
94.57
  • 94.57
  • 90.08
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.31e3
  • 1.31e3
94.16
  • 94.16
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
1.47e3
  • 1.47e3
93.42
  • 93.42
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
1.53e3
  • 1.53e3
93.18
  • 93.18
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
1.73e3
  • 1.73e3
92.27
  • 92.27
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.91e3
  • 1.91e3
91.47
  • 91.47
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
2.17e3
  • 2.17e3
90.30
  • 90.30
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
2.20e3
  • 2.20e3
90.15
  • 90.15
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Bilateria23 species23 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000001846.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota3 genesCompare expression

Paralogy information comes from OMA : ENSCAFG00000001846.

Cross-references

EnsemblENSCAFG00000001846 (CHMP5)
HGNCHGNC:26942 (CHMP5)
EMBLAAEX03007939
Uniprot/SPTREMBLE2RLV2, E2RLV2_CANLF, J9P5J7, J9P5J7_CANLF

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