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C. lupus familiaris Gene: GABRA1 - ENSCAFG00000001883 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000001883
NameGABRA1
Descriptiongamma-aminobutyric acid (GABA) A receptor, alpha 1 [Source:HGNC Symbol;Acc:HGNC:4075]
OrganismCanis lupus familiaris (dog)
Synonym(s)ejm5
Orthologs(s)15 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
385
  • 385
  • 1.13e3
98.28
  • 98.28
  • 94.96
AEIR
  • AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
539
  • 539
97.59
  • 97.59
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
811
  • 811
96.38
  • 96.38
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.10e3
  • 1.10e3
95.08
  • 95.08
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.42e3
  • 1.42e3
93.64
  • 93.64
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
2.90e3
  • 2.90e3
87.03
  • 87.03
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
4.17e3
  • 4.17e3
81.37
  • 81.37
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
5.22e3
  • 5.22e3
  • 1.05e4
76.66
  • 76.66
  • 53.12
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
7.55e3
  • 7.55e3
  • 1.21e4
66.25
  • 66.25
  • 46.04
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.05e4
  • 1.05e4
53.15
  • 53.15
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.08e4
  • 1.08e4
51.76
  • 51.76
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.08e4
  • 1.08e4
  • 1.19e4
  • 1.41e4
51.59
  • 51.59
  • 46.91
  • 37.13
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
1.10e4
  • 1.10e4
50.81
  • 50.81
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.13e4
  • 1.13e4
  • 1.73e4
49.45
  • 49.45
  • 22.71
AEIR
  • AEIR
  • AEIR
UBERON:0002079left cardiac atrium
  • UBERON:0007222late adult stage
1.15e4
  • 1.15e4
48.66
  • 48.66
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.16e4
  • 1.16e4
  • 1.24e4
  • 1.33e4
48.18
  • 48.18
  • 44.56
  • 40.45
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
  • 1.25e4
44.77
  • 44.77
  • 44.01
AEIR
  • AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.29e4
  • 1.29e4
42.45
  • 42.45
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.31e4
  • 1.31e4
41.40
  • 41.40
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.32e4
  • 1.32e4
  • 1.42e4
40.79
  • 40.79
  • 36.29
AEIR
  • AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
1.35e4
  • 1.35e4
39.62
  • 39.62
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.38e4
  • 1.38e4
  • 1.40e4
  • 1.53e4
38.09
  • 38.09
  • 37.28
  • 31.55
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
1.39e4
  • 1.39e4
  • 1.55e4
37.63
  • 37.63
  • 30.70
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.40e4
  • 1.40e4
37.36
  • 37.36
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
1.43e4
  • 1.43e4
36.09
  • 36.09
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.48e4
  • 1.48e4
  • 1.76e4
33.75
  • 33.75
  • 21.36
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.50e4
  • 1.50e4
32.87
  • 32.87
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.53e4
  • 1.53e4
31.47
  • 31.47
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
1.54e4
  • 1.54e4
31.22
  • 31.22
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.54e4
  • 1.54e4
  • 1.60e4
  • 1.72e4
31.06
  • 31.06
  • 28.48
  • 23.01
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
1.60e4
  • 1.60e4
28.43
  • 28.43
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
1.61e4
  • 1.61e4
  • 2.10e4
28.17
  • 28.17
  • 6.29
AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
1.64e4
  • 1.64e4
26.87
  • 26.87
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.70e4
  • 1.70e4
24.01
  • 24.01
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
1.79e4
  • 1.79e4
20.04
  • 20.04
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
1.79e4
  • 1.79e4
20.00
  • 20.00
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.79e4
  • 1.79e4
19.94
  • 19.94
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Amniota13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000001883.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata3 genesCompare expression

Paralogy information comes from OMA : ENSCAFG00000001883.

Cross-references

EnsemblENSCAFG00000001883 (GABRA1)
HGNCHGNC:4075 (GABRA1)
EMBLAAEX03003042
Uniprot/SPTREMBLE2RSP8, E2RSP8_CANLF

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