C. lupus familiaris Gene: PRPF4 - ENSCAFG00000003224 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000003224
NamePRPF4
Descriptionpre-mRNA processing factor 4 [Source:HGNC Symbol;Acc:HGNC:17349]
OrganismCanis lupus familiaris (dog)
Synonym(s)hprp4, hprp4p, prp4, prp4p, snrnp60

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
3.48e3
  • 3.48e3
  • 5.34e3
84.40802
  • 84.40802
  • 76.08365
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
3.72e3
  • 3.72e3
  • 7.97e3
  • 8.50e3
83.34762
  • 83.34762
  • 64.33369
  • 61.95146
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
4.20e3
  • 4.20e3
81.20540
  • 81.20540
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
4.27e3
  • 4.27e3
  • 6.07e3
80.89665
  • 80.89665
  • 72.83145
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
4.57e3
  • 4.57e3
  • 6.59e3
79.54281
  • 79.54281
  • 70.48182
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
4.86e3
  • 4.86e3
78.23303
  • 78.23303
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
5.16e3
  • 5.16e3
76.90310
  • 76.90310
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
5.32e3
  • 5.32e3
  • 8.53e3
76.19004
  • 76.19004
  • 61.79473
AEIR
  • AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
5.60e3
  • 5.60e3
74.91761
  • 74.91761
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
5.64e3
  • 5.64e3
74.76715
  • 74.76715
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
5.71e3
  • 5.71e3
  • 5.72e3
74.41788
  • 74.41788
  • 74.37757
AEIR
  • AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
5.72e3
  • 5.72e3
74.38653
  • 74.38653
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
5.82e3
  • 5.82e3
73.92979
  • 73.92979
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
5.83e3
  • 5.83e3
73.92083
  • 73.92083
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
5.83e3
  • 5.83e3
73.92083
  • 73.92083
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
5.87e3
  • 5.87e3
73.71485
  • 73.71485
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
5.91e3
  • 5.91e3
  • 7.92e3
73.52230
  • 73.52230
  • 64.54402
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
5.93e3
  • 5.93e3
73.43274
  • 73.43274
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
5.94e3
  • 5.94e3
73.39244
  • 73.39244
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
5.95e3
  • 5.95e3
73.36557
  • 73.36557
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
6.03e3
  • 6.03e3
  • 7.01e3
  • 7.86e3
  • 7.87e3
72.98482
  • 72.98482
  • 68.62798
  • 64.83074
  • 64.76912
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
6.11e3
  • 6.11e3
72.66255
  • 72.66255
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
6.27e3
  • 6.27e3
  • 7.67e3
71.95056
  • 71.95056
  • 65.66317
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
6.36e3
  • 6.36e3
71.51173
  • 71.51173
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
6.47e3
  • 6.47e3
71.02364
  • 71.02364
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
6.61e3
  • 6.61e3
70.40570
  • 70.40570
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
6.65e3
  • 6.65e3
70.23106
  • 70.23106
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
6.66e3
  • 6.66e3
70.18037
  • 70.18037
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
6.72e3
  • 6.72e3
  • 6.95e3
69.90417
  • 69.90417
  • 68.89665
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
6.73e3
  • 6.73e3
  • 7.70e3
69.86387
  • 69.86387
  • 65.52423
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
6.85e3
  • 6.85e3
69.34444
  • 69.34444
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
7.19e3
  • 7.19e3
67.81748
  • 67.81748
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
7.25e3
  • 7.25e3
67.52194
  • 67.52194
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
7.34e3
  • 7.34e3
  • 8.07e3
67.15126
  • 67.15126
  • 63.88246
AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
7.35e3
  • 7.35e3
67.08759
  • 67.08759
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
7.41e3
  • 7.41e3
66.84130
  • 66.84130
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
7.44e3
  • 7.44e3
66.69936
  • 66.69936
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
7.46e3
  • 7.46e3
66.58315
  • 66.58315
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
7.54e3
  • 7.54e3
  • 7.91e3
66.25470
  • 66.25470
  • 64.60236
AEIR
  • AEIR
  • AEIR
UBERON:0002079left cardiac atrium
  • UBERON:0007222late adult stage
7.65e3
  • 7.65e3
65.76214
  • 65.76214
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
7.79e3
  • 7.79e3
65.10836
  • 65.10836
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
7.86e3
  • 7.86e3
64.79939
  • 64.79939
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
7.97e3
  • 7.97e3
64.30682
  • 64.30682
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
8.05e3
  • 8.05e3
63.94627
  • 63.94627
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
8.17e3
  • 8.17e3
63.42468
  • 63.42468
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
8.29e3
  • 8.29e3
62.86943
  • 62.86943
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
8.40e3
  • 8.40e3
62.41268
  • 62.41268
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
8.46e3
  • 8.46e3
  • 8.55e3
62.13057
  • 62.13057
  • 61.69640
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
8.48e3
  • 8.48e3
62.04102
  • 62.04102
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
8.49e3
  • 8.49e3
61.98760
  • 61.98760
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
8.67e3
  • 8.67e3
61.16783
  • 61.16783
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAAEX03008082
EnsemblENSCAFG00000003224 (PRPF4)
HGNCHGNC:17349 (PRPF4)
Uniprot/SPTREMBLF1PZB0, F1PZB0_CANLF

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