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C. lupus familiaris Gene: LRRN3 - ENSCAFG00000003297 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000003297
NameLRRN3
Descriptionleucine rich repeat neuronal 3 [Source:HGNC Symbol;Acc:HGNC:17200]
OrganismCanis lupus familiaris (dog)
Synonym(s)figler5, flj11129, nlrr3
Orthologs(s)18 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.41e3
  • 1.41e3
  • 2.58e3
93.72
  • 93.72
  • 88.45
AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
2.06e3
  • 2.06e3
90.78
  • 90.78
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
2.36e3
  • 2.36e3
89.46
  • 89.46
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
3.61e3
  • 3.61e3
  • 5.42e3
83.88
  • 83.88
  • 75.75
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
3.90e3
  • 3.90e3
82.58
  • 82.58
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
4.09e3
  • 4.09e3
81.70
  • 81.70
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
4.75e3
  • 4.75e3
78.76
  • 78.76
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
5.26e3
  • 5.26e3
  • 1.18e4
76.46
  • 76.46
  • 47.14
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
5.98e3
  • 5.98e3
73.28
  • 73.28
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
6.18e3
  • 6.18e3
  • 6.98e3
  • 8.13e3
72.35
  • 72.35
  • 68.78
  • 63.62
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
6.64e3
  • 6.64e3
70.29
  • 70.29
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
8.32e3
  • 8.32e3
62.78
  • 62.78
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
8.48e3
  • 8.48e3
  • 1.16e4
  • 1.18e4
62.09
  • 62.09
  • 48.03
  • 47.23
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
9.70e3
  • 9.70e3
  • 1.66e4
56.61
  • 56.61
  • 25.70
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
  • 2.08e4
48.54
  • 48.54
  • 7.15
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.18e4
  • 1.18e4
  • 1.44e4
47.18
  • 47.18
  • 35.57
AEIR
  • AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
1.21e4
  • 1.21e4
45.92
  • 45.92
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
1.23e4
  • 1.23e4
  • 1.62e4
45.13
  • 45.13
  • 27.46
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
  • 1.30e4
  • 1.43e4
  • 1.59e4
  • 1.69e4
43.62
  • 43.62
  • 41.97
  • 35.84
  • 29.08
  • 24.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
1.29e4
  • 1.29e4
  • 1.60e4
42.48
  • 42.48
  • 28.51
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
1.30e4
  • 1.30e4
  • 1.30e4
  • 1.42e4
41.95
  • 41.95
  • 41.65
  • 36.40
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.34e4
  • 1.34e4
40.03
  • 40.03
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.35e4
  • 1.35e4
  • 1.39e4
39.58
  • 39.58
  • 37.66
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.37e4
  • 1.37e4
38.78
  • 38.78
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.42e4
  • 1.42e4
36.71
  • 36.71
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.42e4
  • 1.42e4
  • 1.69e4
36.44
  • 36.44
  • 24.54
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.43e4
  • 1.43e4
  • 1.43e4
36.10
  • 36.10
  • 35.91
AEIR
  • AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.47e4
  • 1.47e4
34.17
  • 34.17
AEIR
  • AEIR
UBERON:0002079left cardiac atrium
  • UBERON:0007222late adult stage
1.51e4
  • 1.51e4
32.65
  • 32.65
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.51e4
  • 1.51e4
32.51
  • 32.51
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.52e4
  • 1.52e4
32.07
  • 32.07
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
1.52e4
  • 1.52e4
31.91
  • 31.91
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
1.54e4
  • 1.54e4
31.35
  • 31.35
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
1.55e4
  • 1.55e4
30.79
  • 30.79
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.57e4
  • 1.57e4
29.82
  • 29.82
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.72e4
  • 1.72e4
23.03
  • 23.03
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000003297.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSCAFG00000003297.

Cross-references

EnsemblENSCAFG00000003297 (LRRN3)
HGNCHGNC:17200 (LRRN3)
EMBLAAEX03009443
Uniprot/SPTREMBLF1PYL2, F1PYL2_CANLF

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