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C. lupus familiaris Gene: PCBP1 - ENSCAFG00000003326 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000003326
NamePCBP1
Descriptionpoly(rC) binding protein 1 [Source:HGNC Symbol;Acc:HGNC:8647]
OrganismCanis lupus familiaris (dog)
Synonym(s)hnrnp-e1, hnrnp-x, hnrpe1, hnrpx
Orthologs(s)10 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
497
  • 497
  • 968
  • 1.16e3
  • 1.77e3
  • 1.88e3
97.78
  • 97.78
  • 95.68
  • 94.81
  • 92.11
  • 91.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
517
  • 517
  • 915
97.69
  • 97.69
  • 95.91
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
540
  • 540
  • 805
  • 1.19e3
97.59
  • 97.59
  • 96.40
  • 94.68
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
588
  • 588
97.37
  • 97.37
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
601
  • 601
  • 1.11e3
  • 1.33e3
97.32
  • 97.32
  • 95.04
  • 94.07
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
633
  • 633
  • 1.55e3
97.17
  • 97.17
  • 93.08
AEIR
  • AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
635
  • 635
97.16
  • 97.16
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
640
  • 640
  • 857
  • 1.54e3
97.14
  • 97.14
  • 96.17
  • 93.10
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
646
  • 646
  • 1.32e3
97.12
  • 97.12
  • 94.08
AEIR
  • AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
653
  • 653
97.09
  • 97.09
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
680
  • 680
96.96
  • 96.96
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
698
  • 698
  • 1.28e3
96.88
  • 96.88
  • 94.29
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
708
  • 708
96.84
  • 96.84
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
723
  • 723
96.77
  • 96.77
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
734
  • 734
96.72
  • 96.72
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
734
  • 734
96.72
  • 96.72
AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000113post-juvenile adult stage
760
  • 760
96.61
  • 96.61
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
772
  • 772
  • 1.26e3
96.55
  • 96.55
  • 94.38
AEIR
  • AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
778
  • 778
  • 779
96.53
  • 96.53
  • 96.52
AEIR
  • AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
793
  • 793
96.46
  • 96.46
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
820
  • 820
  • 1.55e3
96.34
  • 96.34
  • 93.09
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
854
  • 854
  • 1.44e3
96.19
  • 96.19
  • 93.56
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
897
  • 897
95.99
  • 95.99
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
900
  • 900
95.98
  • 95.98
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
922
  • 922
95.88
  • 95.88
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
929
  • 929
  • 2.43e3
95.85
  • 95.85
  • 89.14
AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
969
  • 969
95.67
  • 95.67
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
972
  • 972
95.66
  • 95.66
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
994
  • 994
95.56
  • 95.56
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.00e3
  • 1.00e3
95.53
  • 95.53
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.01e3
  • 1.01e3
  • 2.37e3
95.47
  • 95.47
  • 89.41
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.07e3
  • 1.07e3
95.24
  • 95.24
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.07e3
  • 1.07e3
95.20
  • 95.20
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.12e3
  • 1.12e3
95.02
  • 95.02
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
1.12e3
  • 1.12e3
95.00
  • 95.00
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
1.19e3
  • 1.19e3
94.67
  • 94.67
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
1.19e3
  • 1.19e3
94.66
  • 94.66
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.21e3
  • 1.21e3
94.61
  • 94.61
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.21e3
  • 1.21e3
  • 3.10e3
94.58
  • 94.58
  • 86.13
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.24e3
  • 1.24e3
  • 2.78e3
94.45
  • 94.45
  • 87.56
AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.25e3
  • 1.25e3
94.41
  • 94.41
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.27e3
  • 1.27e3
  • 1.46e3
94.34
  • 94.34
  • 93.49
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.32e3
  • 1.32e3
94.11
  • 94.11
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
1.33e3
  • 1.33e3
94.04
  • 94.04
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
1.49e3
  • 1.49e3
93.33
  • 93.33
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
1.57e3
  • 1.57e3
92.97
  • 92.97
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.58e3
  • 1.58e3
92.96
  • 92.96
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.61e3
  • 1.61e3
92.79
  • 92.79
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.64e3
  • 1.64e3
  • 5.71e3
92.66
  • 92.66
  • 74.47
AEIR
  • AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
1.69e3
  • 1.69e3
92.43
  • 92.43
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.72e3
  • 1.72e3
92.30
  • 92.30
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
2.02e3
  • 2.02e3
90.96
  • 90.96
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
2.11e3
  • 2.11e3
90.55
  • 90.55
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
2.16e3
  • 2.16e3
90.34
  • 90.34
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
2.75e3
  • 2.75e3
87.73
  • 87.73
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata4 genesCompare expression

Paralogy information comes from OMA : ENSCAFG00000003326.

Cross-references

EnsemblENSCAFG00000003326 (PCBP1)
HGNCHGNC:8647 (PCBP1)
EMBLAAEX03007630
Uniprot/SPTREMBLJ9P7Y9, J9P7Y9_CANLF

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