C. lupus familiaris Gene: VAX2 - ENSCAFG00000003434 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000003434
NameVAX2
Descriptionventral anterior homeobox 2 [Source:HGNC Symbol;Acc:HGNC:12661]
OrganismCanis lupus familiaris (dog)
Synonym(s)dres93

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.31e4
  • 1.31e4
41.39799
  • 41.39799
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
40.87408
  • 40.87408
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
1.46e4
  • 1.46e4
34.66326
  • 34.66326
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.46e4
  • 1.46e4
34.47519
  • 34.47519
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
1.54e4
  • 1.54e4
30.95545
  • 30.95545
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.55e4
  • 1.55e4
  • 1.74e4
30.67347
  • 30.67347
  • 22.11625
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.68e4
  • 1.68e4
24.58383
  • 24.58383
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.69e4
  • 1.69e4
24.50296
  • 24.50296
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.71e4
  • 1.71e4
23.65664
  • 23.65664
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.77e4
  • 1.77e4
20.54903
  • 20.54903
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
1.94e4
  • 1.94e4
13.13805
  • 13.13805
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAAEX03007652, AAEX03007653
EnsemblENSCAFG00000003434 (VAX2)
HGNCHGNC:12661 (VAX2)
Uniprot/SPTREMBLF1PF43, F1PF43_CANLF

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