C. lupus familiaris Gene: CDK5RAP2 - ENSCAFG00000003560 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000003560
NameCDK5RAP2
DescriptionCDK5 regulatory subunit associated protein 2 [Source:HGNC Symbol;Acc:HGNC:18672]
OrganismCanis lupus familiaris (dog)
Synonym(s)c48, cep215, flj10867, mcph3

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
5.19e3
  • 5.19e3
  • 1.26e4
76.75981
  • 76.75981
  • 43.41913
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
5.89e3
  • 5.89e3
73.63057
  • 73.63057
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
6.85e3
  • 6.85e3
  • 1.16e4
69.33172
  • 69.33172
  • 48.24467
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
8.36e3
  • 8.36e3
  • 1.06e4
  • 1.15e4
62.58539
  • 62.58539
  • 52.45388
  • 48.70589
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
8.86e3
  • 8.86e3
60.32151
  • 60.32151
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
9.12e3
  • 9.12e3
59.18122
  • 59.18122
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
9.14e3
  • 9.14e3
59.08114
  • 59.08114
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
9.17e3
  • 9.17e3
58.95128
  • 58.95128
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
9.26e3
  • 9.26e3
  • 1.07e4
  • 1.08e4
  • 1.32e4
58.52861
  • 58.52861
  • 52.15055
  • 51.54935
  • 40.78229
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
9.30e3
  • 9.30e3
  • 1.07e4
58.38066
  • 58.38066
  • 52.22685
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
9.32e3
  • 9.32e3
58.25273
  • 58.25273
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
9.33e3
  • 9.33e3
  • 1.15e4
58.22860
  • 58.22860
  • 48.62529
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
9.63e3
  • 9.63e3
56.87802
  • 56.87802
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
9.67e3
  • 9.67e3
  • 1.07e4
56.71668
  • 56.71668
  • 51.89414
AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
9.72e3
  • 9.72e3
56.46158
  • 56.46158
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
9.79e3
  • 9.79e3
56.16156
  • 56.16156
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
9.97e3
  • 9.97e3
55.37910
  • 55.37910
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.00e4
  • 1.00e4
  • 1.25e4
55.18538
  • 55.18538
  • 44.16980
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
1.01e4
  • 1.01e4
54.77790
  • 54.77790
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
1.02e4
  • 1.02e4
54.25193
  • 54.25193
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.03e4
  • 1.03e4
53.85993
  • 53.85993
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
1.04e4
  • 1.04e4
53.53305
  • 53.53305
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.04e4
  • 1.04e4
53.44797
  • 53.44797
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.04e4
  • 1.04e4
  • 1.06e4
53.35841
  • 53.35841
  • 52.75837
AEIR
  • AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
  • 1.12e4
53.13004
  • 53.13004
  • 49.75157
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.06e4
  • 1.06e4
  • 1.16e4
52.60613
  • 52.60613
  • 47.88196
AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.06e4
  • 1.06e4
  • 1.10e4
52.46279
  • 52.46279
  • 50.66546
AEIR
  • AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
1.07e4
  • 1.07e4
52.27028
  • 52.27028
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
1.07e4
  • 1.07e4
52.10908
  • 52.10908
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
1.07e4
  • 1.07e4
51.93892
  • 51.93892
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
1.08e4
  • 1.08e4
51.66577
  • 51.66577
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.09e4
  • 1.09e4
51.17320
  • 51.17320
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
50.77020
  • 50.77020
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.12e4
  • 1.12e4
  • 1.20e4
49.65968
  • 49.65968
  • 46.14007
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.13e4
  • 1.13e4
49.58356
  • 49.58356
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.16e4
  • 1.16e4
  • 1.25e4
47.93991
  • 47.93991
  • 43.86978
AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
1.17e4
  • 1.17e4
47.64464
  • 47.64464
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.17e4
  • 1.17e4
47.51478
  • 47.51478
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
1.19e4
  • 1.19e4
46.90579
  • 46.90579
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
1.19e4
  • 1.19e4
46.82071
  • 46.82071
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.19e4
  • 1.19e4
46.57890
  • 46.57890
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
1.21e4
  • 1.21e4
45.89378
  • 45.89378
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
1.22e4
  • 1.22e4
45.53108
  • 45.53108
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.22e4
  • 1.22e4
45.52212
  • 45.52212
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.22e4
  • 1.22e4
45.15964
  • 45.15964
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.23e4
  • 1.23e4
44.84148
  • 44.84148
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
44.27127
  • 44.27127
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.26e4
  • 1.26e4
  • 1.29e4
43.67800
  • 43.67800
  • 42.04281
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.27e4
  • 1.27e4
43.06672
  • 43.06672
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.31e4
  • 1.31e4
41.30396
  • 41.30396
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.34e4
  • 1.34e4
40.05911
  • 40.05911
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAAEX03008161, AAEX03008162
EnsemblENSCAFG00000003560 (CDK5RAP2)
HGNCHGNC:18672 (CDK5RAP2)
Uniprot/SPTREMBLF1PBT2, F1PBT2_CANLF

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