C. lupus familiaris Gene: TRAF1 - ENSCAFG00000003587 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000003587
NameTRAF1
DescriptionTNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]
OrganismCanis lupus familiaris (dog)
Synonym(s)ebi6

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000178blood
  • UBERON:0000104life cycle
5.38e3
  • 5.38e3
75.93588
  • 75.93588
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
6.95e3
  • 6.95e3
  • 1.37e4
68.89217
  • 68.89217
  • 38.70142
AEIR
  • AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
7.07e3
  • 7.07e3
68.32796
  • 68.32796
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
7.60e3
  • 7.60e3
65.96812
  • 65.96812
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
8.18e3
  • 8.18e3
  • 1.02e4
63.36199
  • 63.36199
  • 54.12860
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
8.55e3
  • 8.55e3
  • 1.03e4
  • 1.34e4
61.70070
  • 61.70070
  • 53.79724
  • 39.84865
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
8.57e3
  • 8.57e3
61.64867
  • 61.64867
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
8.80e3
  • 8.80e3
60.59466
  • 60.59466
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
8.84e3
  • 8.84e3
60.40211
  • 60.40211
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
8.86e3
  • 8.86e3
60.33495
  • 60.33495
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
9.14e3
  • 9.14e3
59.07218
  • 59.07218
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
9.19e3
  • 9.19e3
58.83933
  • 58.83933
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
9.78e3
  • 9.78e3
  • 1.13e4
56.20634
  • 56.20634
  • 49.61114
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.06e4
  • 1.06e4
  • 1.26e4
52.38671
  • 52.38671
  • 43.77575
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
  • 1.42e4
50.85527
  • 50.85527
  • 36.55897
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.11e4
  • 1.11e4
  • 1.14e4
50.23285
  • 50.23285
  • 49.08651
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.11e4
  • 1.11e4
50.21762
  • 50.21762
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
1.11e4
  • 1.11e4
50.16120
  • 50.16120
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.12e4
  • 1.12e4
  • 1.32e4
49.80297
  • 49.80297
  • 40.73975
AEIR
  • AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.12e4
  • 1.12e4
49.74207
  • 49.74207
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
1.13e4
  • 1.13e4
49.37757
  • 49.37757
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.14e4
  • 1.14e4
  • 1.24e4
49.03345
  • 49.03345
  • 44.59775
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.14e4
  • 1.14e4
48.85814
  • 48.85814
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
1.15e4
  • 1.15e4
48.71933
  • 48.71933
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.15e4
  • 1.15e4
  • 1.48e4
48.45513
  • 48.45513
  • 33.51545
AEIR
  • AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.16e4
  • 1.16e4
  • 1.20e4
48.11710
  • 48.11710
  • 46.22515
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.17e4
  • 1.17e4
47.55956
  • 47.55956
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.17e4
  • 1.17e4
47.55060
  • 47.55060
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
1.17e4
  • 1.17e4
47.51030
  • 47.51030
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.20e4
  • 1.20e4
46.32814
  • 46.32814
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.20e4
  • 1.20e4
  • 1.37e4
46.26294
  • 46.26294
  • 38.57693
AEIR
  • AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
1.21e4
  • 1.21e4
46.03260
  • 46.03260
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.22e4
  • 1.22e4
45.21762
  • 45.21762
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
1.24e4
  • 1.24e4
  • 1.26e4
  • 1.32e4
  • 1.45e4
44.57729
  • 44.57729
  • 43.37699
  • 40.99498
  • 35.15435
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.24e4
  • 1.24e4
44.56833
  • 44.56833
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
1.25e4
  • 1.25e4
44.11159
  • 44.11159
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
1.25e4
  • 1.25e4
44.03546
  • 44.03546
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
1.25e4
  • 1.25e4
44.00412
  • 44.00412
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.26e4
  • 1.26e4
43.41304
  • 43.41304
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.27e4
  • 1.27e4
43.04138
  • 43.04138
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
1.31e4
  • 1.31e4
41.49651
  • 41.49651
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
40.92482
  • 40.92482
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
1.34e4
  • 1.34e4
39.89343
  • 39.89343
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.35e4
  • 1.35e4
  • 1.48e4
39.62126
  • 39.62126
  • 33.90202
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.36e4
  • 1.36e4
39.07366
  • 39.07366
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.37e4
  • 1.37e4
  • 1.38e4
38.81260
  • 38.81260
  • 38.22018
AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.39e4
  • 1.39e4
37.65896
  • 37.65896
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.42e4
  • 1.42e4
36.61437
  • 36.61437
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.45e4
  • 1.45e4
35.13792
  • 35.13792
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.47e4
  • 1.47e4
34.38617
  • 34.38617
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.50e4
  • 1.50e4
32.93032
  • 32.93032
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.55e4
  • 1.55e4
30.42092
  • 30.42092
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

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