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C. lupus familiaris Gene: SLC17A7 - ENSCAFG00000003665 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000003665
NameSLC17A7
Descriptionsolute carrier family 17 (vesicular glutamate transporter), member 7 [Source:HGNC Symbol;Acc:HGNC:16704]
OrganismCanis lupus familiaris (dog)
Synonym(s)bnpi, vglut1
Orthologs(s)23 orthologs
Paralog(s)28 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
170
  • 170
99.24
  • 99.24
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
312
  • 312
98.61
  • 98.61
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
376
  • 376
98.32
  • 98.32
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
455
  • 455
97.97
  • 97.97
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
647
  • 647
  • 910
97.11
  • 97.11
  • 95.93
AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.69e3
  • 1.69e3
92.46
  • 92.46
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
4.44e3
  • 4.44e3
  • 1.44e4
  • 1.47e4
80.14
  • 80.14
  • 35.77
  • 34.09
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
1.02e4
  • 1.02e4
54.55
  • 54.55
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
47.44
  • 47.44
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.21e4
  • 1.21e4
  • 1.42e4
45.99
  • 45.99
  • 36.64
AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.28e4
  • 1.28e4
42.91
  • 42.91
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
1.34e4
  • 1.34e4
40.03
  • 40.03
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.39e4
  • 1.39e4
37.98
  • 37.98
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
1.44e4
  • 1.44e4
35.78
  • 35.78
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.45e4
  • 1.45e4
35.20
  • 35.20
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.45e4
  • 1.45e4
35.07
  • 35.07
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
1.50e4
  • 1.50e4
  • 1.78e4
33.04
  • 33.04
  • 20.62
AEIR
  • AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.54e4
  • 1.54e4
31.19
  • 31.19
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.55e4
  • 1.55e4
  • 1.89e4
30.83
  • 30.83
  • 15.65
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.55e4
  • 1.55e4
  • 1.67e4
30.83
  • 30.83
  • 25.53
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.56e4
  • 1.56e4
30.18
  • 30.18
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.60e4
  • 1.60e4
28.38
  • 28.38
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
1.60e4
  • 1.60e4
  • 1.72e4
28.29
  • 28.29
  • 22.93
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.61e4
  • 1.61e4
  • 1.78e4
28.16
  • 28.16
  • 20.43
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.61e4
  • 1.61e4
  • 1.83e4
28.12
  • 28.12
  • 18.01
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.63e4
  • 1.63e4
27.05
  • 27.05
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.64e4
  • 1.64e4
  • 1.74e4
26.62
  • 26.62
  • 22.01
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.66e4
  • 1.66e4
  • 1.81e4
25.71
  • 25.71
  • 18.98
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.75e4
  • 1.75e4
21.79
  • 21.79
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression
Bilateria23 species23 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000003665.

Paralogs (same species)

Cross-references

EnsemblENSCAFG00000003665 (SLC17A7)
HGNCHGNC:16704 (SLC17A7)
EMBLAAEX03000800
Uniprot/SPTREMBLF6Y4M4, F6Y4M4_CANLF

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