C. lupus familiaris Gene: HMGB4 - ENSCAFG00000003671 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000003671
NameHMGB4
Descriptionhigh mobility group box 4 [Source:HGNC Symbol;Acc:HGNC:24954]
OrganismCanis lupus familiaris (dog)
Synonym(s)flj40388

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
270
  • 270
  • 2.28e3
98.79545
  • 98.79545
  • 89.79881
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
7.86e3
  • 7.86e3
64.79491
  • 64.79491
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.08e4
  • 1.08e4
51.78220
  • 51.78220
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.19e4
  • 1.19e4
46.60577
  • 46.60577
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.23e4
  • 1.23e4
44.90865
  • 44.90865
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.39e4
  • 1.39e4
37.65001
  • 37.65001
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.40e4
  • 1.40e4
37.45934
  • 37.45934
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.49e4
  • 1.49e4
  • 1.77e4
33.38913
  • 33.38913
  • 20.85796
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
1.50e4
  • 1.50e4
32.86763
  • 32.86763
AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • UBERON:0000104life cycle
1.64e4
  • 1.64e4
26.39996
  • 26.39996
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.66e4
  • 1.66e4
25.58660
  • 25.58660
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
1.80e4
  • 1.80e4
19.47689
  • 19.47689
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.80e4
  • 1.80e4
19.35384
  • 19.35384
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
2.00e4
  • 2.00e4
10.47873
  • 10.47873
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAAEX03009686
EnsemblENSCAFG00000003671 (HMGB4)
HGNCHGNC:24954 (HMGB4)
Uniprot/SPTREMBLJ9NZL7, J9NZL7_CANLF

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