C. lupus familiaris Gene: PRDM1 - ENSCAFG00000003694 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000003694
NamePRDM1
DescriptionPR domain containing 1, with ZNF domain [Source:HGNC Symbol;Acc:HGNC:9346]
OrganismCanis lupus familiaris (dog)
Synonym(s)blimp1, prdi-bf1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.40e3
  • 1.40e3
  • 1.66e4
93.73545
  • 93.73545
  • 25.59811
AEIR
  • AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
2.46e3
  • 2.46e3
88.97994
  • 88.97994
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
3.41e3
  • 3.41e3
84.75690
  • 84.75690
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
4.30e3
  • 4.30e3
80.76303
  • 80.76303
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
4.36e3
  • 4.36e3
80.49884
  • 80.49884
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
4.42e3
  • 4.42e3
  • 1.23e4
80.20571
  • 80.20571
  • 44.97134
AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
5.33e3
  • 5.33e3
76.15977
  • 76.15977
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
5.81e3
  • 5.81e3
  • 8.50e3
73.97860
  • 73.97860
  • 61.93355
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
5.89e3
  • 5.89e3
73.62529
  • 73.62529
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
6.00e3
  • 6.00e3
73.15959
  • 73.15959
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
6.29e3
  • 6.29e3
71.82518
  • 71.82518
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
6.57e3
  • 6.57e3
70.56690
  • 70.56690
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
6.79e3
  • 6.79e3
  • 8.33e3
69.59072
  • 69.59072
  • 62.68583
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
8.15e3
  • 8.15e3
  • 8.22e3
63.49633
  • 63.49633
  • 63.21870
AEIR
  • AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
8.46e3
  • 8.46e3
62.12610
  • 62.12610
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
8.92e3
  • 8.92e3
60.07657
  • 60.07657
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
9.01e3
  • 9.01e3
59.68117
  • 59.68117
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.04e4
  • 1.04e4
  • 1.16e4
  • 1.23e4
53.31363
  • 53.31363
  • 48.21333
  • 45.03363
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
1.10e4
  • 1.10e4
50.95827
  • 50.95827
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
1.17e4
  • 1.17e4
47.58642
  • 47.58642
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.18e4
  • 1.18e4
  • 1.28e4
47.20840
  • 47.20840
  • 42.71225
AEIR
  • AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
1.21e4
  • 1.21e4
46.03260
  • 46.03260
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.21e4
  • 1.21e4
  • 1.47e4
45.89826
  • 45.89826
  • 34.00054
AEIR
  • AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.21e4
  • 1.21e4
  • 1.30e4
45.62511
  • 45.62511
  • 41.73352
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.23e4
  • 1.23e4
  • 1.41e4
45.06815
  • 45.06815
  • 36.65444
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.24e4
  • 1.24e4
44.59072
  • 44.59072
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
1.25e4
  • 1.25e4
44.13398
  • 44.13398
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.25e4
  • 1.25e4
  • 1.39e4
44.01308
  • 44.01308
  • 37.67343
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.25e4
  • 1.25e4
  • 1.34e4
43.96382
  • 43.96382
  • 39.97851
AEIR
  • AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.29e4
  • 1.29e4
42.15923
  • 42.15923
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
1.31e4
  • 1.31e4
41.22336
  • 41.22336
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.32e4
  • 1.32e4
40.85169
  • 40.85169
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.33e4
  • 1.33e4
40.66765
  • 40.66765
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.33e4
  • 1.33e4
40.49346
  • 40.49346
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
1.34e4
  • 1.34e4
40.12628
  • 40.12628
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
1.34e4
  • 1.34e4
40.04567
  • 40.04567
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
1.35e4
  • 1.35e4
39.36056
  • 39.36056
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.36e4
  • 1.36e4
38.93068
  • 38.93068
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.37e4
  • 1.37e4
38.80978
  • 38.80978
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.37e4
  • 1.37e4
  • 1.37e4
  • 1.41e4
  • 1.41e4
38.75157
  • 38.75157
  • 38.61557
  • 36.90713
  • 36.66488
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.37e4
  • 1.37e4
38.63514
  • 38.63514
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
1.37e4
  • 1.37e4
38.44259
  • 38.44259
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.44e4
  • 1.44e4
35.46333
  • 35.46333
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.46e4
  • 1.46e4
  • 1.59e4
34.77521
  • 34.77521
  • 28.82375
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.49e4
  • 1.49e4
33.30785
  • 33.30785
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.51e4
  • 1.51e4
32.54523
  • 32.54523
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.55e4
  • 1.55e4
30.76455
  • 30.76455
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.56e4
  • 1.56e4
  • 1.60e4
30.23464
  • 30.23464
  • 28.56372
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.65e4
  • 1.65e4
26.17835
  • 26.17835
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.66e4
  • 1.66e4
25.69855
  • 25.69855
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAAEX03008581
EnsemblENSCAFG00000003694 (PRDM1)
HGNCHGNC:9346 (PRDM1)
Uniprot/SPTREMBLF1PFR8, F1PFR8_CANLF

Do not show this banner again