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C. lupus familiaris Gene: SF3B6 - ENSCAFG00000003957 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000003957
NameSF3B6
Descriptionsplicing factor 3b subunit 6 [Source:HGNC Symbol;Acc:HGNC:30096]
OrganismCanis lupus familiaris (dog)
Synonym(s)cgi-110, ht006, p14, sap14a, sf3b14a
Orthologs(s)26 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
238
  • 238
  • 394
  • 462
98.94
  • 98.94
  • 98.24
  • 97.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
248
  • 248
  • 905
98.89
  • 98.89
  • 95.96
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
283
  • 283
  • 505
98.74
  • 98.74
  • 97.74
AEIR
  • AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
312
  • 312
98.61
  • 98.61
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
328
  • 328
98.54
  • 98.54
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
329
  • 329
  • 1.27e3
98.53
  • 98.53
  • 94.33
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
329
  • 329
  • 614
98.53
  • 98.53
  • 97.26
AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
334
  • 334
98.51
  • 98.51
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
340
  • 340
  • 585
98.48
  • 98.48
  • 97.39
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
342
  • 342
  • 562
98.48
  • 98.48
  • 97.49
AEIR
  • AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
344
  • 344
98.47
  • 98.47
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
360
  • 360
98.39
  • 98.39
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
364
  • 364
98.38
  • 98.38
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
367
  • 367
  • 370
  • 594
98.36
  • 98.36
  • 98.35
  • 97.35
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
367
  • 367
  • 772
98.36
  • 98.36
  • 96.55
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
381
  • 381
  • 562
98.30
  • 98.30
  • 97.49
AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
381
  • 381
  • 648
98.30
  • 98.30
  • 97.11
AEIR
  • AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
389
  • 389
98.26
  • 98.26
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
391
  • 391
98.26
  • 98.26
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
399
  • 399
  • 464
  • 758
98.22
  • 98.22
  • 97.93
  • 96.61
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
404
  • 404
  • 551
98.20
  • 98.20
  • 97.54
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
433
  • 433
98.07
  • 98.07
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
450
  • 450
  • 833
97.99
  • 97.99
  • 96.28
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
452
  • 452
  • 462
  • 555
  • 955
  • 968
97.98
  • 97.98
  • 97.94
  • 97.52
  • 95.73
  • 95.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
457
  • 457
97.96
  • 97.96
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
471
  • 471
97.90
  • 97.90
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
477
  • 477
97.87
  • 97.87
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
478
  • 478
97.87
  • 97.87
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
489
  • 489
97.82
  • 97.82
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
517
  • 517
97.69
  • 97.69
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
539
  • 539
97.59
  • 97.59
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
542
  • 542
97.58
  • 97.58
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
544
  • 544
97.57
  • 97.57
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
544
  • 544
97.57
  • 97.57
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
556
  • 556
97.52
  • 97.52
AEIR
  • AEIR
UBERON:0002079left cardiac atrium
  • UBERON:0007222late adult stage
569
  • 569
97.46
  • 97.46
AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
582
  • 582
97.40
  • 97.40
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
589
  • 589
97.37
  • 97.37
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
595
  • 595
97.34
  • 97.34
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
619
  • 619
97.24
  • 97.24
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
689
  • 689
96.92
  • 96.92
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
691
  • 691
  • 1.05e3
96.91
  • 96.91
  • 95.32
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
737
  • 737
  • 787
96.71
  • 96.71
  • 96.48
AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
749
  • 749
96.65
  • 96.65
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
775
  • 775
96.54
  • 96.54
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
813
  • 813
96.37
  • 96.37
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
959
  • 959
  • 1.18e3
95.72
  • 95.72
  • 94.73
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
985
  • 985
95.60
  • 95.60
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
993
  • 993
95.56
  • 95.56
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.02e3
  • 1.02e3
95.43
  • 95.43
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.10e3
  • 1.10e3
  • 1.74e3
95.11
  • 95.11
  • 92.25
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.27e3
  • 1.27e3
94.31
  • 94.31
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
1.69e3
  • 1.69e3
92.44
  • 92.44
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.77e3
  • 1.77e3
92.10
  • 92.10
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression
Bilateria26 species26 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000003957.

Cross-references

EnsemblENSCAFG00000003957 (SF3B6)
HGNCHGNC:30096 (SF3B6)
EMBLAAEX03010780
Uniprot/SPTREMBLE2RRA3, E2RRA3_CANLF

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