C. lupus familiaris Gene: - ENSCAFG00000003993 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000003993
Name-
Description-
OrganismCanis lupus familiaris (dog)
Synonym(s)pscd2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.47e3
  • 1.47e3
  • 3.07e3
93.44438
  • 93.44438
  • 86.27808
AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.82e3
  • 1.82e3
91.85922
  • 91.85922
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.77e3
  • 2.77e3
  • 5.01e3
87.61866
  • 87.61866
  • 77.58342
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
2.81e3
  • 2.81e3
87.41716
  • 87.41716
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
2.86e3
  • 2.86e3
  • 4.42e3
87.17983
  • 87.17983
  • 80.21673
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
2.87e3
  • 2.87e3
  • 4.53e3
87.13483
  • 87.13483
  • 79.73478
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
2.93e3
  • 2.93e3
  • 3.98e3
86.86853
  • 86.86853
  • 82.16461
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
2.95e3
  • 2.95e3
  • 4.17e3
86.81144
  • 86.81144
  • 81.33620
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
2.96e3
  • 2.96e3
86.77234
  • 86.77234
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
3.05e3
  • 3.05e3
  • 6.46e3
86.35142
  • 86.35142
  • 71.06394
AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
3.05e3
  • 3.05e3
86.35142
  • 86.35142
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
3.05e3
  • 3.05e3
86.33351
  • 86.33351
AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • UBERON:0000104life cycle
3.08e3
  • 3.08e3
86.21154
  • 86.21154
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
3.10e3
  • 3.10e3
86.12753
  • 86.12753
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
3.17e3
  • 3.17e3
85.81506
  • 85.81506
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
3.20e3
  • 3.20e3
85.65816
  • 85.65816
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
3.48e3
  • 3.48e3
84.43050
  • 84.43050
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
3.53e3
  • 3.53e3
84.21149
  • 84.21149
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
3.53e3
  • 3.53e3
84.18413
  • 84.18413
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
3.60e3
  • 3.60e3
83.86620
  • 83.86620
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
3.62e3
  • 3.62e3
  • 4.86e3
83.78112
  • 83.78112
  • 78.23907
AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
3.91e3
  • 3.91e3
82.50493
  • 82.50493
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
3.98e3
  • 3.98e3
82.16908
  • 82.16908
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
4.02e3
  • 4.02e3
81.98997
  • 81.98997
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
4.04e3
  • 4.04e3
  • 5.33e3
81.93623
  • 81.93623
  • 76.12843
AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
4.17e3
  • 4.17e3
  • 4.40e3
81.34350
  • 81.34350
  • 80.29545
AEIR
  • AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
4.21e3
  • 4.21e3
81.13917
  • 81.13917
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
4.26e3
  • 4.26e3
  • 4.43e3
80.93892
  • 80.93892
  • 80.17195
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
4.37e3
  • 4.37e3
  • 4.52e3
  • 4.78e3
80.41823
  • 80.41823
  • 79.77790
  • 78.62198
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
4.39e3
  • 4.39e3
  • 5.09e3
80.34659
  • 80.34659
  • 77.21207
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
4.39e3
  • 4.39e3
  • 5.59e3
80.33472
  • 80.33472
  • 74.99104
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
4.42e3
  • 4.42e3
80.21225
  • 80.21225
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
4.48e3
  • 4.48e3
79.93015
  • 79.93015
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
4.53e3
  • 4.53e3
79.71968
  • 79.71968
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
4.58e3
  • 4.58e3
79.48236
  • 79.48236
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
4.67e3
  • 4.67e3
79.07487
  • 79.07487
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
4.69e3
  • 4.69e3
78.99427
  • 78.99427
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
4.84e3
  • 4.84e3
  • 5.20e3
78.35393
  • 78.35393
  • 76.70871
AEIR
  • AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
4.85e3
  • 4.85e3
78.29124
  • 78.29124
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
4.91e3
  • 4.91e3
78.04048
  • 78.04048
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
4.92e3
  • 4.92e3
77.95540
  • 77.95540
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
5.05e3
  • 5.05e3
77.37328
  • 77.37328
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
5.21e3
  • 5.21e3
76.67988
  • 76.67988
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
5.24e3
  • 5.24e3
76.52248
  • 76.52248
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
5.29e3
  • 5.29e3
76.32993
  • 76.32993
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
5.37e3
  • 5.37e3
75.94483
  • 75.94483
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
5.53e3
  • 5.53e3
75.25524
  • 75.25524
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
5.66e3
  • 5.66e3
74.64177
  • 74.64177
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
5.82e3
  • 5.82e3
73.93973
  • 73.93973
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
5.95e3
  • 5.95e3
73.37005
  • 73.37005
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
6.13e3
  • 6.13e3
72.55956
  • 72.55956
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
6.29e3
  • 6.29e3
  • 6.44e3
  • 6.83e3
  • 8.09e3
71.84757
  • 71.84757
  • 71.16694
  • 69.43274
  • 63.76675
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

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