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C. lupus familiaris Gene: SEC61A1 - ENSCAFG00000004107 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000004107
NameSEC61A1
Descriptionprotein transport protein Sec61 subunit alpha isoform 1 [Source:RefSeq peptide;Acc:NP_001003315]
OrganismCanis lupus familiaris (dog)
Orthologs(s)27 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001264pancreas
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
257
  • 257
  • 328
  • 783
98.86
  • 98.86
  • 98.54
  • 96.50
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
553
  • 553
97.53
  • 97.53
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
581
  • 581
  • 1.04e3
97.41
  • 97.41
  • 95.38
AEIR
  • AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
582
  • 582
97.40
  • 97.40
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
623
  • 623
97.22
  • 97.22
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
671
  • 671
  • 1.29e3
97.00
  • 97.00
  • 94.23
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
720
  • 720
  • 1.26e3
96.78
  • 96.78
  • 94.37
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
757
  • 757
  • 4.15e3
96.62
  • 96.62
  • 81.45
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
763
  • 763
  • 1.31e3
96.59
  • 96.59
  • 94.17
AEIR
  • AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
767
  • 767
96.57
  • 96.57
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
833
  • 833
96.28
  • 96.28
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
857
  • 857
  • 1.28e3
96.17
  • 96.17
  • 94.27
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
870
  • 870
96.11
  • 96.11
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
908
  • 908
  • 3.60e3
95.94
  • 95.94
  • 83.90
AEIR
  • AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
950
  • 950
95.76
  • 95.76
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.01e3
  • 1.01e3
95.49
  • 95.49
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.05e3
  • 1.05e3
  • 1.07e3
  • 1.55e3
  • 1.64e3
  • 1.66e3
95.30
  • 95.30
  • 95.21
  • 93.09
  • 92.68
  • 92.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000059large intestine
  • UBERON:0000113post-juvenile adult stage
1.05e3
  • 1.05e3
95.29
  • 95.29
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
1.14e3
  • 1.14e3
  • 1.22e3
  • 1.54e3
94.89
  • 94.89
  • 94.55
  • 93.11
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.16e3
  • 1.16e3
  • 1.53e3
94.82
  • 94.82
  • 93.18
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.16e3
  • 1.16e3
  • 2.57e3
94.80
  • 94.80
  • 88.50
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.18e3
  • 1.18e3
  • 1.37e3
94.74
  • 94.74
  • 93.90
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.19e3
  • 1.19e3
94.68
  • 94.68
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
1.22e3
  • 1.22e3
94.56
  • 94.56
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.34e3
  • 1.34e3
  • 1.44e3
  • 1.92e3
94.02
  • 94.02
  • 93.55
  • 91.40
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
1.35e3
  • 1.35e3
93.99
  • 93.99
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.37e3
  • 1.37e3
93.86
  • 93.86
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.39e3
  • 1.39e3
93.77
  • 93.77
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.43e3
  • 1.43e3
  • 1.92e3
93.61
  • 93.61
  • 91.42
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.46e3
  • 1.46e3
93.48
  • 93.48
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.48e3
  • 1.48e3
93.40
  • 93.40
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.50e3
  • 1.50e3
  • 1.62e3
93.30
  • 93.30
  • 92.74
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.73e3
  • 1.73e3
  • 3.75e3
92.25
  • 92.25
  • 83.22
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.76e3
  • 1.76e3
92.15
  • 92.15
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.76e3
  • 1.76e3
92.13
  • 92.13
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.94e3
  • 1.94e3
  • 2.75e3
91.34
  • 91.34
  • 87.72
AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
2.04e3
  • 2.04e3
90.90
  • 90.90
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
2.22e3
  • 2.22e3
90.07
  • 90.07
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
2.39e3
  • 2.39e3
89.33
  • 89.33
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
2.52e3
  • 2.52e3
88.72
  • 88.72
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
2.67e3
  • 2.67e3
88.05
  • 88.05
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
2.94e3
  • 2.94e3
86.84
  • 86.84
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
2.99e3
  • 2.99e3
86.62
  • 86.62
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
3.40e3
  • 3.40e3
84.82
  • 84.82
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
3.42e3
  • 3.42e3
84.71
  • 84.71
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
3.43e3
  • 3.43e3
84.66
  • 84.66
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
3.50e3
  • 3.50e3
  • 3.81e3
84.34
  • 84.34
  • 82.95
AEIR
  • AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
3.52e3
  • 3.52e3
84.28
  • 84.28
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
3.52e3
  • 3.52e3
84.25
  • 84.25
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
3.56e3
  • 3.56e3
84.07
  • 84.07
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
3.75e3
  • 3.75e3
83.25
  • 83.25
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
3.75e3
  • 3.75e3
  • 3.90e3
83.23
  • 83.23
  • 82.56
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
4.04e3
  • 4.04e3
81.94
  • 81.94
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
4.24e3
  • 4.24e3
81.06
  • 81.06
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
4.25e3
  • 4.25e3
81.02
  • 81.02
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Carnivora1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species20 genesCompare expression
Bilateria26 species27 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000004107.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSCAFG00000004107.

Cross-references

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