C. lupus familiaris Gene: LRRC17 - ENSCAFG00000004274 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000004274
NameLRRC17
Descriptionleucine rich repeat containing 17 [Source:HGNC Symbol;Acc:HGNC:16895]
OrganismCanis lupus familiaris (dog)
Synonym(s)h_rg318m05.3, p37nb

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
3.42e3
  • 3.42e3
  • 1.18e4
84.68941
  • 84.68941
  • 47.24610
AEIR
  • AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
3.57e3
  • 3.57e3
  • 3.77e3
84.03220
  • 84.03220
  • 83.14078
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
4.16e3
  • 4.16e3
  • 1.42e4
  • 1.51e4
81.38720
  • 81.38720
  • 36.50367
  • 32.26312
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
4.61e3
  • 4.61e3
  • 1.59e4
79.34354
  • 79.34354
  • 28.65995
AEIR
  • AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
5.41e3
  • 5.41e3
75.77467
  • 75.77467
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
6.14e3
  • 6.14e3
  • 1.24e4
72.51558
  • 72.51558
  • 44.33777
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
6.18e3
  • 6.18e3
72.32214
  • 72.32214
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
7.98e3
  • 7.98e3
64.27100
  • 64.27100
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
8.47e3
  • 8.47e3
  • 9.90e3
62.06900
  • 62.06900
  • 55.69040
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
8.73e3
  • 8.73e3
60.89916
  • 60.89916
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
8.81e3
  • 8.81e3
  • 9.81e3
  • 1.17e4
  • 1.27e4
60.56582
  • 60.56582
  • 56.07648
  • 47.54621
  • 43.25631
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
9.19e3
  • 9.19e3
  • 1.02e4
58.83499
  • 58.83499
  • 54.12413
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
9.25e3
  • 9.25e3
  • 1.21e4
58.56618
  • 58.56618
  • 45.70513
AEIR
  • AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
9.36e3
  • 9.36e3
58.08705
  • 58.08705
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.04e4
  • 1.04e4
  • 1.59e4
53.23303
  • 53.23303
  • 28.72560
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.09e4
  • 1.09e4
51.19559
  • 51.19559
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
1.15e4
  • 1.15e4
48.39692
  • 48.39692
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
1.15e4
  • 1.15e4
48.33423
  • 48.33423
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
1.16e4
  • 1.16e4
48.25363
  • 48.25363
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
1.16e4
  • 1.16e4
48.08889
  • 48.08889
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
1.18e4
  • 1.18e4
47.00878
  • 47.00878
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.19e4
  • 1.19e4
  • 1.58e4
46.68189
  • 46.68189
  • 29.24503
AEIR
  • AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.20e4
  • 1.20e4
46.08186
  • 46.08186
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.25e4
  • 1.25e4
44.25488
  • 44.25488
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
43.67276
  • 43.67276
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
43.36826
  • 43.36826
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.27e4
  • 1.27e4
  • 1.33e4
43.12646
  • 43.12646
  • 40.40140
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.28e4
  • 1.28e4
  • 1.34e4
42.71449
  • 42.71449
  • 40.09789
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.29e4
  • 1.29e4
  • 1.39e4
42.24879
  • 42.24879
  • 37.61642
AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
1.30e4
  • 1.30e4
41.98012
  • 41.98012
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.31e4
  • 1.31e4
41.33083
  • 41.33083
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.34e4
  • 1.34e4
40.22067
  • 40.22067
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
1.34e4
  • 1.34e4
40.08598
  • 40.08598
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.37e4
  • 1.37e4
38.85904
  • 38.85904
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
1.40e4
  • 1.40e4
37.25596
  • 37.25596
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.40e4
  • 1.40e4
37.10819
  • 37.10819
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
1.44e4
  • 1.44e4
35.54093
  • 35.54093
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
1.44e4
  • 1.44e4
35.44241
  • 35.44241
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.47e4
  • 1.47e4
34.40287
  • 34.40287
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.50e4
  • 1.50e4
32.97958
  • 32.97958
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
1.50e4
  • 1.50e4
32.88044
  • 32.88044
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.51e4
  • 1.51e4
32.31905
  • 32.31905
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.56e4
  • 1.56e4
30.20330
  • 30.20330
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
1.56e4
  • 1.56e4
30.19434
  • 30.19434
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.58e4
  • 1.58e4
29.34009
  • 29.34009
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
1.60e4
  • 1.60e4
28.26885
  • 28.26885
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAAEX03011251
EnsemblENSCAFG00000004274 (LRRC17)
HGNCHGNC:16895 (LRRC17)
Uniprot/SPTREMBLF1PJE6, F1PJE6_CANLF

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