C. lupus familiaris Gene: PDSS1 - ENSCAFG00000004332 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000004332
NamePDSS1
Descriptionprenyl (decaprenyl) diphosphate synthase, subunit 1 [Source:HGNC Symbol;Acc:HGNC:17759]
OrganismCanis lupus familiaris (dog)
Synonym(s)coq1, tprt, tpt

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002370thymus
  • UBERON:0000104life cycle
2.69e3
  • 2.69e3
87.96346
  • 87.96346
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
3.60e3
  • 3.60e3
83.89307
  • 83.89307
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
3.81e3
  • 3.81e3
82.93928
  • 82.93928
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
4.02e3
  • 4.02e3
82.02131
  • 82.02131
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
4.02e3
  • 4.02e3
  • 7.84e3
82.00363
  • 82.00363
  • 64.90238
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
4.27e3
  • 4.27e3
80.87050
  • 80.87050
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
4.95e3
  • 4.95e3
77.82106
  • 77.82106
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
5.05e3
  • 5.05e3
  • 5.40e3
77.38057
  • 77.38057
  • 75.84184
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
5.10e3
  • 5.10e3
  • 7.56e3
77.15140
  • 77.15140
  • 66.15086
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
5.14e3
  • 5.14e3
  • 6.66e3
  • 7.45e3
  • 7.58e3
77.00367
  • 77.00367
  • 70.19949
  • 66.66219
  • 66.07559
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
5.16e3
  • 5.16e3
76.89414
  • 76.89414
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
5.17e3
  • 5.17e3
76.85384
  • 76.85384
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
5.36e3
  • 5.36e3
  • 5.47e3
75.99225
  • 75.99225
  • 75.48961
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
5.59e3
  • 5.59e3
  • 7.96e3
74.96418
  • 74.96418
  • 64.36504
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
5.62e3
  • 5.62e3
  • 1.03e4
  • 1.07e4
74.83705
  • 74.83705
  • 53.82859
  • 52.19864
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
5.67e3
  • 5.67e3
  • 6.78e3
74.63729
  • 74.63729
  • 69.65789
AEIR
  • AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
6.19e3
  • 6.19e3
72.27745
  • 72.27745
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
6.20e3
  • 6.20e3
  • 6.47e3
72.23231
  • 72.23231
  • 71.03260
AEIR
  • AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
6.28e3
  • 6.28e3
  • 7.82e3
71.86996
  • 71.86996
  • 64.97519
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
6.39e3
  • 6.39e3
71.38205
  • 71.38205
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
6.51e3
  • 6.51e3
  • 8.19e3
70.85205
  • 70.85205
  • 63.31721
AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
6.69e3
  • 6.69e3
70.04881
  • 70.04881
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
6.73e3
  • 6.73e3
69.89065
  • 69.89065
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
7.31e3
  • 7.31e3
67.26670
  • 67.26670
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
7.38e3
  • 7.38e3
66.95773
  • 66.95773
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
7.49e3
  • 7.49e3
66.47860
  • 66.47860
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
7.49e3
  • 7.49e3
  • 7.97e3
66.45952
  • 66.45952
  • 64.30235
AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
7.56e3
  • 7.56e3
66.16514
  • 66.16514
AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • UBERON:0000104life cycle
7.61e3
  • 7.61e3
65.92410
  • 65.92410
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
7.64e3
  • 7.64e3
  • 8.18e3
65.81587
  • 65.81587
  • 63.38989
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
7.91e3
  • 7.91e3
64.57997
  • 64.57997
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
7.98e3
  • 7.98e3
64.26652
  • 64.26652
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
8.00e3
  • 8.00e3
64.16353
  • 64.16353
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
8.03e3
  • 8.03e3
64.03367
  • 64.03367
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
8.07e3
  • 8.07e3
63.85245
  • 63.85245
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
8.09e3
  • 8.09e3
63.76052
  • 63.76052
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
8.17e3
  • 8.17e3
  • 9.06e3
63.42468
  • 63.42468
  • 59.44833
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
8.31e3
  • 8.31e3
  • 9.24e3
62.81569
  • 62.81569
  • 58.61544
AEIR
  • AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
8.57e3
  • 8.57e3
61.61114
  • 61.61114
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
8.79e3
  • 8.79e3
60.65287
  • 60.65287
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
8.85e3
  • 8.85e3
60.38420
  • 60.38420
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
9.01e3
  • 9.01e3
59.64087
  • 59.64087
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
9.07e3
  • 9.07e3
59.39011
  • 59.39011
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
9.14e3
  • 9.14e3
59.09457
  • 59.09457
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
9.16e3
  • 9.16e3
58.99606
  • 58.99606
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
9.35e3
  • 9.35e3
58.11840
  • 58.11840
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
9.46e3
  • 9.46e3
57.63478
  • 57.63478
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
9.53e3
  • 9.53e3
57.32903
  • 57.32903
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
9.79e3
  • 9.79e3
56.15668
  • 56.15668
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
9.82e3
  • 9.82e3
56.04066
  • 56.04066
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.01e4
  • 1.01e4
54.67043
  • 54.67043
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
48.58512
  • 48.58512
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAAEX03001171
EnsemblENSCAFG00000004332 (PDSS1)
HGNCHGNC:17759 (PDSS1)
Uniprot/SPTREMBLF1PV51, F1PV51_CANLF

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