C. lupus familiaris Gene: LIMS2 - ENSCAFG00000004355 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000004355
NameLIMS2
DescriptionLIM and senescent cell antigen-like domains 2 [Source:HGNC Symbol;Acc:HGNC:16084]
OrganismCanis lupus familiaris (dog)
Synonym(s)pinch-2, pinch2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
350
  • 350
98.43722
  • 98.43722
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
577
  • 577
  • 3.65e3
97.42074
  • 97.42074
  • 83.66855
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
682
  • 682
  • 2.22e3
96.95056
  • 96.95056
  • 90.05015
AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
882
  • 882
96.05499
  • 96.05499
AEIR
  • AEIR
UBERON:0002079left cardiac atrium
  • UBERON:0007222late adult stage
1.00e3
  • 1.00e3
95.51764
  • 95.51764
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.06e3
  • 1.06e3
  • 1.40e3
95.25412
  • 95.25412
  • 93.75193
AEIR
  • AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
1.06e3
  • 1.06e3
95.24897
  • 95.24897
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.11e3
  • 1.11e3
  • 1.33e3
95.01379
  • 95.01379
  • 94.03099
AEIR
  • AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
1.20e3
  • 1.20e3
94.62207
  • 94.62207
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
1.56e3
  • 1.56e3
93.04138
  • 93.04138
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.67e3
  • 1.67e3
  • 2.30e3
92.53985
  • 92.53985
  • 89.72774
AEIR
  • AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.72e3
  • 1.72e3
92.29357
  • 92.29357
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.82e3
  • 1.82e3
  • 8.37e3
91.85026
  • 91.85026
  • 62.53439
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.82e3
  • 1.82e3
91.84578
  • 91.84578
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
1.86e3
  • 1.86e3
  • 3.44e3
  • 3.49e3
  • 7.33e3
91.66667
  • 91.66667
  • 84.60250
  • 84.37220
  • 67.17258
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.93e3
  • 1.93e3
  • 7.80e3
91.35322
  • 91.35322
  • 65.07635
AEIR
  • AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
2.17e3
  • 2.17e3
90.28851
  • 90.28851
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
2.20e3
  • 2.20e3
  • 2.75e3
  • 8.90e3
90.13523
  • 90.13523
  • 87.68135
  • 60.16514
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
2.45e3
  • 2.45e3
89.03367
  • 89.03367
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
2.49e3
  • 2.49e3
88.85904
  • 88.85904
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
2.65e3
  • 2.65e3
88.12466
  • 88.12466
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
2.85e3
  • 2.85e3
  • 3.31e3
87.24252
  • 87.24252
  • 85.18270
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
2.89e3
  • 2.89e3
87.05893
  • 87.05893
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
3.07e3
  • 3.07e3
86.24843
  • 86.24843
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
3.89e3
  • 3.89e3
82.59896
  • 82.59896
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
3.93e3
  • 3.93e3
82.39746
  • 82.39746
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
4.00e3
  • 4.00e3
82.11087
  • 82.11087
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
4.15e3
  • 4.15e3
81.42576
  • 81.42576
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
4.32e3
  • 4.32e3
80.66004
  • 80.66004
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
5.39e3
  • 5.39e3
75.88761
  • 75.88761
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
5.64e3
  • 5.64e3
74.77163
  • 74.77163
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
6.52e3
  • 6.52e3
70.81766
  • 70.81766
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
7.04e3
  • 7.04e3
68.47125
  • 68.47125
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
7.30e3
  • 7.30e3
67.29805
  • 67.29805
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
7.39e3
  • 7.39e3
  • 8.56e3
66.90847
  • 66.90847
  • 61.68279
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
7.50e3
  • 7.50e3
66.41582
  • 66.41582
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
7.52e3
  • 7.52e3
66.33083
  • 66.33083
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
7.86e3
  • 7.86e3
64.79782
  • 64.79782
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
8.03e3
  • 8.03e3
64.05159
  • 64.05159
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
8.57e3
  • 8.57e3
61.62457
  • 61.62457
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
8.96e3
  • 8.96e3
59.88716
  • 59.88716
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
9.49e3
  • 9.49e3
57.49149
  • 57.49149
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
9.64e3
  • 9.64e3
56.84798
  • 56.84798
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
9.71e3
  • 9.71e3
  • 1.12e4
56.54281
  • 56.54281
  • 49.75372
AEIR
  • AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
9.98e3
  • 9.98e3
55.31524
  • 55.31524
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.00e4
  • 1.00e4
55.18315
  • 55.18315
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.00e4
  • 1.00e4
  • 1.09e4
55.12010
  • 55.12010
  • 51.32281
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.04e4
  • 1.04e4
  • 1.09e4
53.41662
  • 53.41662
  • 51.08611
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
48.58947
  • 48.58947
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.30e4
  • 1.30e4
41.83060
  • 41.83060
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAAEX03011837
EnsemblENSCAFG00000004355 (LIMS2)
HGNCHGNC:16084 (LIMS2)
Uniprot/SPTREMBLE2RNC7, E2RNC7_CANLF, F1PUC6, F1PUC6_CANLF

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