C. lupus familiaris Gene: TMCC1 - ENSCAFG00000004596 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000004596
NameTMCC1
Descriptiontransmembrane and coiled-coil domain family 1 [Source:HGNC Symbol;Acc:HGNC:29116]
OrganismCanis lupus familiaris (dog)
Synonym(s)kiaa0779

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
2.89e3
  • 2.89e3
87.04997
  • 87.04997
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
3.95e3
  • 3.95e3
  • 5.23e3
  • 5.41e3
  • 6.98e3
82.31994
  • 82.31994
  • 76.59413
  • 75.79706
  • 68.75927
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
4.30e3
  • 4.30e3
80.73169
  • 80.73169
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
5.16e3
  • 5.16e3
76.88967
  • 76.88967
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
5.28e3
  • 5.28e3
76.34923
  • 76.34923
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
5.38e3
  • 5.38e3
75.91349
  • 75.91349
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
5.40e3
  • 5.40e3
75.83736
  • 75.83736
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
5.53e3
  • 5.53e3
  • 8.14e3
75.25296
  • 75.25296
  • 63.54558
AEIR
  • AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
5.54e3
  • 5.54e3
75.20598
  • 75.20598
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
5.74e3
  • 5.74e3
74.31936
  • 74.31936
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
5.80e3
  • 5.80e3
74.03511
  • 74.03511
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
5.86e3
  • 5.86e3
73.76858
  • 73.76858
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
5.93e3
  • 5.93e3
  • 6.62e3
73.47304
  • 73.47304
  • 70.35178
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
6.25e3
  • 6.25e3
72.04012
  • 72.04012
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
6.50e3
  • 6.50e3
  • 7.30e3
70.90744
  • 70.90744
  • 67.29666
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
6.62e3
  • 6.62e3
70.36092
  • 70.36092
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
6.66e3
  • 6.66e3
  • 7.78e3
70.19524
  • 70.19524
  • 65.17105
AEIR
  • AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
6.76e3
  • 6.76e3
  • 7.39e3
69.72058
  • 69.72058
  • 66.89499
AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
6.94e3
  • 6.94e3
68.91456
  • 68.91456
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
6.96e3
  • 6.96e3
68.82500
  • 68.82500
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
7.09e3
  • 7.09e3
68.27423
  • 68.27423
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
7.19e3
  • 7.19e3
  • 8.00e3
67.81300
  • 67.81300
  • 64.19658
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
7.30e3
  • 7.30e3
67.33387
  • 67.33387
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
7.34e3
  • 7.34e3
67.12789
  • 67.12789
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
7.40e3
  • 7.40e3
  • 9.24e3
66.89056
  • 66.89056
  • 58.64231
AEIR
  • AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
7.43e3
  • 7.43e3
66.74279
  • 66.74279
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
7.47e3
  • 7.47e3
  • 8.60e3
  • 9.58e3
66.55472
  • 66.55472
  • 61.50815
  • 57.08745
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
7.54e3
  • 7.54e3
66.25918
  • 66.25918
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
7.78e3
  • 7.78e3
65.16658
  • 65.16658
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
7.82e3
  • 7.82e3
65.00985
  • 65.00985
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
7.95e3
  • 7.95e3
  • 9.11e3
64.42773
  • 64.42773
  • 59.20876
AEIR
  • AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
7.95e3
  • 7.95e3
64.38743
  • 64.38743
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
8.02e3
  • 8.02e3
  • 8.93e3
64.10084
  • 64.10084
  • 60.02597
AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
8.05e3
  • 8.05e3
63.93964
  • 63.93964
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
8.25e3
  • 8.25e3
  • 8.27e3
63.05302
  • 63.05302
  • 62.97689
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
8.51e3
  • 8.51e3
61.88738
  • 61.88738
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
8.63e3
  • 8.63e3
61.34247
  • 61.34247
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
8.64e3
  • 8.64e3
61.30266
  • 61.30266
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
8.65e3
  • 8.65e3
61.27082
  • 61.27082
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
8.74e3
  • 8.74e3
60.85438
  • 60.85438
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
8.85e3
  • 8.85e3
60.38868
  • 60.38868
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
8.88e3
  • 8.88e3
60.24333
  • 60.24333
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
9.04e3
  • 9.04e3
59.53788
  • 59.53788
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
9.39e3
  • 9.39e3
57.93928
  • 57.93928
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
9.45e3
  • 9.45e3
57.70643
  • 57.70643
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
9.52e3
  • 9.52e3
57.37354
  • 57.37354
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
9.55e3
  • 9.55e3
57.24073
  • 57.24073
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
9.64e3
  • 9.64e3
  • 1.03e4
56.82747
  • 56.82747
  • 54.09256
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.00e4
  • 1.00e4
55.16085
  • 55.16085
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.11e4
  • 1.11e4
  • 1.13e4
50.09851
  • 50.09851
  • 49.42683
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAAEX03012059
EnsemblENSCAFG00000004596 (TMCC1)
HGNCHGNC:29116 (TMCC1)
Uniprot/SPTREMBLF1PJ93, F1PJ93_CANLF

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