We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

C. lupus familiaris Gene: APOE - ENSCAFG00000004617 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000004617
NameAPOE
Descriptionapolipoprotein E [Source:HGNC Symbol;Acc:HGNC:613]
OrganismCanis lupus familiaris (dog)
Synonym(s)ad2
Orthologs(s)13 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
3.00
  • 3.00
  • 13.5
  • 32.0
  • 36.5
  • 590
99.99
  • 99.99
  • 99.94
  • 99.86
  • 99.84
  • 97.36
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002021occipital lobe
  • UBERON:0000113post-juvenile adult stage
7.38
  • 7.38
99.97
  • 99.97
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0000113post-juvenile adult stage
8.46
  • 8.46
99.97
  • 99.97
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
17.0
  • 17.0
99.93
  • 99.93
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
23.0
  • 23.0
99.90
  • 99.90
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
24.0
  • 24.0
99.90
  • 99.90
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
46.5
  • 46.5
99.80
  • 99.80
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
56.0
  • 56.0
  • 239
  • 1.02e4
99.75
  • 99.75
  • 98.94
  • 54.54
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
60.0
  • 60.0
99.74
  • 99.74
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
65.0
  • 65.0
99.71
  • 99.71
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
66.7
  • 66.7
99.71
  • 99.71
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
75.0
  • 75.0
99.67
  • 99.67
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
84.0
  • 84.0
  • 111
99.63
  • 99.63
  • 99.51
AEIR
  • AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
90.5
  • 90.5
99.60
  • 99.60
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
106
  • 106
  • 336
99.53
  • 99.53
  • 98.50
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
160
  • 160
  • 2.56e3
99.29
  • 99.29
  • 88.55
AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
197
  • 197
99.12
  • 99.12
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
204
  • 204
99.09
  • 99.09
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
210
  • 210
  • 311
99.07
  • 99.07
  • 98.61
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
220
  • 220
  • 280
  • 597
99.02
  • 99.02
  • 98.75
  • 97.33
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
220
  • 220
  • 1.04e3
99.02
  • 99.02
  • 95.36
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
244
  • 244
  • 533
98.91
  • 98.91
  • 97.62
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
257
  • 257
  • 746
98.85
  • 98.85
  • 96.67
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
281
  • 281
  • 362
  • 1.74e3
98.75
  • 98.75
  • 98.39
  • 92.23
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
286
  • 286
98.72
  • 98.72
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
302
  • 302
  • 7.54e3
98.65
  • 98.65
  • 66.30
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
315
  • 315
  • 1.17e3
98.60
  • 98.60
  • 94.75
AEIR
  • AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
328
  • 328
98.54
  • 98.54
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
392
  • 392
98.25
  • 98.25
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
411
  • 411
  • 881
98.16
  • 98.16
  • 96.06
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
428
  • 428
98.09
  • 98.09
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
524
  • 524
97.66
  • 97.66
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
557
  • 557
97.51
  • 97.51
AEIR
  • AEIR
UBERON:0001723tongue
  • UBERON:0000113post-juvenile adult stage
595
  • 595
97.34
  • 97.34
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
619
  • 619
  • 6.05e3
97.24
  • 97.24
  • 72.96
AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
  • UBERON:0000113post-juvenile adult stage
621
  • 621
  • 1.41e3
97.23
  • 97.23
  • 93.71
AEIR
  • AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
627
  • 627
97.20
  • 97.20
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
653
  • 653
97.08
  • 97.08
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
700
  • 700
96.87
  • 96.87
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
709
  • 709
  • 3.80e3
96.83
  • 96.83
  • 83.03
AEIR
  • AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
865
  • 865
96.14
  • 96.14
AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
932
  • 932
95.84
  • 95.84
AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
1.10e3
  • 1.10e3
95.10
  • 95.10
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.12e3
  • 1.12e3
94.98
  • 94.98
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
1.43e3
  • 1.43e3
93.61
  • 93.61
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
1.55e3
  • 1.55e3
93.09
  • 93.09
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.74e3
  • 1.74e3
92.22
  • 92.22
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
2.04e3
  • 2.04e3
  • 9.20e3
90.89
  • 90.89
  • 58.87
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
3.25e3
  • 3.25e3
85.47
  • 85.47
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
3.70e3
  • 3.70e3
83.44
  • 83.44
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
4.41e3
  • 4.41e3
80.28
  • 80.28
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
9.20e3
  • 9.20e3
58.84
  • 58.84
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
1.16e4
  • 1.16e4
48.29
  • 48.29
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria2 species2 genesCompare expression
Boreoeutheria8 species8 genesCompare expression
Theria9 species9 genesCompare expression
Mammalia10 species10 genesCompare expression
Tetrapoda11 species11 genesCompare expression
Euteleostomi12 species13 genesCompare expression

Orthology information comes from OMA : ENSCAFG00000004617.

Cross-references

EnsemblENSCAFG00000004617 (APOE)
HGNCHGNC:613 (APOE)
EMBLAAEX03000895
Uniprot/SPTREMBLF1PJ74, F1PJ74_CANLF

Do not show this banner again