C. lupus familiaris Gene: IRGC - ENSCAFG00000004727 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000004727
NameIRGC
Descriptionimmunity-related GTPase family, cinema [Source:HGNC Symbol;Acc:HGNC:28835]
OrganismCanis lupus familiaris (dog)
Synonym(s)cinema, iigp5, irgc1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000104life cycle
3.53e3
  • 3.53e3
84.21839
  • 84.21839
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
6.02e3
  • 6.02e3
73.06108
  • 73.06108
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.01e4
  • 1.01e4
54.71968
  • 54.71968
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.22e4
  • 1.22e4
  • 1.66e4
45.47734
  • 45.47734
  • 25.50658
AEIR
  • AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.26e4
  • 1.26e4
  • 1.39e4
43.56977
  • 43.56977
  • 37.87337
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
1.29e4
  • 1.29e4
  • 1.46e4
  • 1.48e4
  • 1.49e4
42.16371
  • 42.16371
  • 34.55579
  • 33.61822
  • 33.07809
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.31e4
  • 1.31e4
  • 1.52e4
41.32635
  • 41.32635
  • 32.02579
AEIR
  • AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
41.00394
  • 41.00394
AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
1.33e4
  • 1.33e4
40.51245
  • 40.51245
AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
1.34e4
  • 1.34e4
40.07429
  • 40.07429
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.37e4
  • 1.37e4
  • 1.46e4
38.63066
  • 38.63066
  • 34.43937
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.38e4
  • 1.38e4
  • 1.55e4
38.38886
  • 38.38886
  • 30.40480
AEIR
  • AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
1.39e4
  • 1.39e4
37.89181
  • 37.89181
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
1.40e4
  • 1.40e4
37.21565
  • 37.21565
AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
1.40e4
  • 1.40e4
37.15744
  • 37.15744
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.41e4
  • 1.41e4
  • 1.46e4
37.06341
  • 37.06341
  • 34.44385
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
36.74790
  • 36.74790
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
1.43e4
  • 1.43e4
36.05588
  • 36.05588
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.43e4
  • 1.43e4
  • 1.58e4
35.92155
  • 35.92155
  • 29.10881
AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.44e4
  • 1.44e4
  • 1.49e4
35.70648
  • 35.70648
  • 33.28681
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
1.44e4
  • 1.44e4
35.54988
  • 35.54988
AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
1.45e4
  • 1.45e4
35.13344
  • 35.13344
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.45e4
  • 1.45e4
35.06179
  • 35.06179
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.46e4
  • 1.46e4
  • 1.52e4
34.45509
  • 34.45509
  • 31.94967
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.47e4
  • 1.47e4
  • 1.58e4
34.15493
  • 34.15493
  • 29.11069
AEIR
  • AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
1.47e4
  • 1.47e4
34.01397
  • 34.01397
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
1.48e4
  • 1.48e4
33.74978
  • 33.74978
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
1.50e4
  • 1.50e4
32.65270
  • 32.65270
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
1.52e4
  • 1.52e4
32.05714
  • 32.05714
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
1.53e4
  • 1.53e4
31.39889
  • 31.39889
AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
1.54e4
  • 1.54e4
31.08786
  • 31.08786
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.55e4
  • 1.55e4
  • 1.82e4
30.75407
  • 30.75407
  • 18.72116
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
1.57e4
  • 1.57e4
29.90328
  • 29.90328
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.57e4
  • 1.57e4
  • 1.64e4
29.56296
  • 29.56296
  • 26.49991
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.58e4
  • 1.58e4
  • 1.61e4
29.31412
  • 29.31412
  • 28.06636
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.61e4
  • 1.61e4
27.84345
  • 27.84345
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
1.62e4
  • 1.62e4
27.61974
  • 27.61974
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
1.62e4
  • 1.62e4
27.59269
  • 27.59269
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.65e4
  • 1.65e4
26.08723
  • 26.08723
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
1.71e4
  • 1.71e4
23.46749
  • 23.46749
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAAEX03000906
EnsemblENSCAFG00000004727 (IRGC)
HGNCHGNC:28835 (IRGC)
Uniprot/SPTREMBLF6V5R3, F6V5R3_CANLF

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