C. lupus familiaris Gene: XRCC1 - ENSCAFG00000004746 - Canis lupus familiaris (dog)

General information

Ensembl IDENSCAFG00000004746
NameXRCC1
DescriptionX-ray repair complementing defective repair in Chinese hamster cells 1 [Source:HGNC Symbol;Acc:HGNC:12828]
OrganismCanis lupus familiaris (dog)
Synonym(s)rcc

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002048lung
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
3.23e3
  • 3.23e3
  • 6.50e3
  • 6.66e3
85.52333
  • 85.52333
  • 70.90722
  • 70.19524
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002073hair follicle
  • UBERON:0000104life cycle
3.26e3
  • 3.26e3
85.42003
  • 85.42003
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000104life cycle
3.44e3
  • 3.44e3
84.58714
  • 84.58714
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
3.73e3
  • 3.73e3
83.28296
  • 83.28296
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
3.84e3
  • 3.84e3
  • 8.40e3
82.81341
  • 82.81341
  • 62.38380
AEIR
  • AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • UBERON:0007222late adult stage
3.93e3
  • 3.93e3
82.41985
  • 82.41985
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
4.59e3
  • 4.59e3
  • 6.69e3
79.43529
  • 79.43529
  • 70.03851
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000112sexually immature stage
4.64e3
  • 4.64e3
79.22349
  • 79.22349
AEIR
  • AEIR
UBERON:0001911mammary gland
  • UBERON:0000104life cycle
4.70e3
  • 4.70e3
78.97636
  • 78.97636
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
4.79e3
  • 4.79e3
  • 6.45e3
78.54796
  • 78.54796
  • 71.12663
AEIR
  • AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0007222late adult stage
4.80e3
  • 4.80e3
78.52409
  • 78.52409
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
5.24e3
  • 5.24e3
  • 8.51e3
76.52476
  • 76.52476
  • 61.88429
AEIR
  • AEIR
  • AEIR
UBERON:0001259mucosa of urinary bladder
  • UBERON:0000104life cycle
5.35e3
  • 5.35e3
76.05597
  • 76.05597
AEIR
  • AEIR
UBERON:0001255urinary bladder
  • UBERON:0007222late adult stage
5.52e3
  • 5.52e3
75.28211
  • 75.28211
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
5.55e3
  • 5.55e3
75.14777
  • 75.14777
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
5.57e3
  • 5.57e3
  • 5.69e3
75.08508
  • 75.08508
  • 74.53430
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
5.60e3
  • 5.60e3
  • 8.12e3
74.91004
  • 74.91004
  • 63.62619
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
5.61e3
  • 5.61e3
  • 6.06e3
74.88358
  • 74.88358
  • 72.86405
AEIR
  • AEIR
  • AEIR
CL:0000312keratinocyte
  • UBERON:0000104life cycle
5.64e3
  • 5.64e3
74.74476
  • 74.74476
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
5.68e3
  • 5.68e3
  • 8.28e3
  • 8.75e3
  • 1.06e4
74.55629
  • 74.55629
  • 62.90973
  • 60.83199
  • 52.73182
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001235adrenal cortex
  • UBERON:0018241prime adult stage
5.77e3
  • 5.77e3
74.16514
  • 74.16514
AEIR
  • AEIR
UBERON:0002135mitral valve
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
5.84e3
  • 5.84e3
  • 7.26e3
73.85366
  • 73.85366
  • 67.48531
AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • UBERON:0000104life cycle
6.11e3
  • 6.11e3
72.64544
  • 72.64544
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0007222late adult stage
6.13e3
  • 6.13e3
72.55060
  • 72.55060
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
6.39e3
  • 6.39e3
  • 6.55e3
71.37740
  • 71.37740
  • 70.69676
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
6.44e3
  • 6.44e3
  • 6.95e3
71.18037
  • 71.18037
  • 68.86978
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
6.45e3
  • 6.45e3
71.11768
  • 71.11768
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000104life cycle
6.69e3
  • 6.69e3
70.05194
  • 70.05194
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0007222late adult stage
6.72e3
  • 6.72e3
69.93552
  • 69.93552
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000104life cycle
6.83e3
  • 6.83e3
69.43847
  • 69.43847
AEIR
  • AEIR
UBERON:0002046thyroid gland
  • UBERON:0007222late adult stage
6.95e3
  • 6.95e3
68.89217
  • 68.89217
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000104life cycle
7.02e3
  • 7.02e3
68.56529
  • 68.56529
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
7.04e3
  • 7.04e3
  • 7.27e3
68.48343
  • 68.48343
  • 67.44582
AEIR
  • AEIR
  • AEIR
UBERON:0002078right cardiac atrium
  • UBERON:0007222late adult stage
7.38e3
  • 7.38e3
66.94877
  • 66.94877
AEIR
  • AEIR
UBERON:0002418cartilage tissue
  • UBERON:0007222late adult stage
7.53e3
  • 7.53e3
66.30844
  • 66.30844
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000104life cycle
7.74e3
  • 7.74e3
65.33674
  • 65.33674
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
7.78e3
  • 7.78e3
65.15314
  • 65.15314
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0007222late adult stage
7.95e3
  • 7.95e3
64.40534
  • 64.40534
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
8.00e3
  • 8.00e3
64.18019
  • 64.18019
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
8.26e3
  • 8.26e3
  • 9.25e3
63.02615
  • 63.02615
  • 58.59883
AEIR
  • AEIR
  • AEIR
UBERON:0000362renal medulla
  • UBERON:0007222late adult stage
8.53e3
  • 8.53e3
61.79921
  • 61.79921
AEIR
  • AEIR
UBERON:0001135smooth muscle tissue
  • UBERON:0000104life cycle
8.61e3
  • 8.61e3
61.43203
  • 61.43203
AEIR
  • AEIR
UBERON:0002080heart right ventricle
  • UBERON:0007222late adult stage
8.80e3
  • 8.80e3
60.59914
  • 60.59914
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0007222late adult stage
8.83e3
  • 8.83e3
60.47627
  • 60.47627
AEIR
  • AEIR
UBERON:0003382cardiac muscle of left ventricle
  • UBERON:0000104life cycle
9.10e3
  • 9.10e3
59.25578
  • 59.25578
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0007222late adult stage
9.21e3
  • 9.21e3
58.74978
  • 58.74978
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0007222late adult stage
9.29e3
  • 9.29e3
58.40946
  • 58.40946
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0007222late adult stage
9.44e3
  • 9.44e3
57.71539
  • 57.71539
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000104life cycle
9.52e3
  • 9.52e3
57.37955
  • 57.37955
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
53.69873
  • 53.69873
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAAEX03000909
EnsemblENSCAFG00000004746 (XRCC1)
HGNCHGNC:12828 (XRCC1)
Uniprot/SPTREMBLF1PEQ7, F1PEQ7_CANLF

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